Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0352 ATGAACCCAGCAACGTCTTTCACTCCTTCTTCTCCCCAAAATTCCCCGCTTGACGAGGGAGATTCTGTGCCGGACCCTCTTGAATGCTTACAAGAGAACCCTGTTCCGCCGTTTCTCTCCAAAACCTTCGATCTCGTGGACGATCCCTCGCTGGATCAGATCATTTCGTGGGGCTCTGCAGGTGTGAGTTTCGTGGTGTGGGATCCTATGGAGTTTTCAAGACACGTCTTGCCAAGGAACTTCAAGCATAACAATTTCTCGAGTTTTGTTCGTCAGCTGAATACTTATGTGGGTATTGACTTCTGTAACAAGCCCCGTAAGGGCTGTCTGAGCTGTAGAGGATTCCGCAAGATTGACGCTGATAAGTTGGAGTTTTTCAATGAGTATTTCCAGCGAGGGAAGAGGCATCTTCTGAAGAACATCCAAAGGCGCAGGGCGCCACCACAATCCCAGCAACTCGGTATATATATTGGGCCATCTGGTGATGCAGCAAAGCCTGAACTTGAGGTTGAGGTAGAAAAACTGAGGAGGGAGAGGAGTGTTTTGATGCAAGAGGTGGTTGAATTGCAACAACAGCAGAGAACAACAGTTCAACATGCAAGAGAAGTGAATCAGAGGCTCCAATCTGCAGAGCTTAGGCAGAAACAAATGGTTTCTTTCTTGGCAAGGTTTTTCCAAAACCCGACCCTTTTAGCTTGCAATAAGCACGAGAAGGAACAAAGAGCTATAGATTCTCCTAGGGTGAGAAGGAAGTTTGTCAAACACCACCAGCACCAAATGGGAATATCTGGTTCCTTGGAGGAAGGGCAAATTGTGAGGTACCAACCTGATTGGAGAAATCCGGTTCCCGTCGAACAGTCTCCTCAGTACTTTTCACAGGGCTTGGCAAGAGAGTTGAATGAAGGCTCAAAAAATCTGACTTCACAGGTTGAAACCTCCGTATCTCATGAATTAGGCGCGGTGCATGATGCTATGCCAACTTCAAACATCATAGGAGAAGGATCATCAAGCATTGGACTTGAAGATCCCCTTTTCAAGGGGAAAAATGTCATGAGCCTAAATCAAGAAGTTGTTCCTGAAGAGTACTTAGTTTCTTTCCCAGATGATTTGACTAAGGAAAGAGGATTTCCTGAGTTTCCCTTTCTTGGAACTGAAAACTTGAACACTAGCTACAATGTTAGTGGCTCTGGTTTGAGCTCTGTAAATGATCCTTGGGGAGATCACATCAGTCATGAAGTGCCAGGATTTGGAGTCACAAGTGGTATCTCAGACATGTGGGATATGAACTCTCTGCATTCTGCAGGAAATTTGGCAAGTGATGAGTATCCTCTTGGTCAGCCAAAAGATAATAGAAACAAGAGTATAGGTCCATAA 1374 0.4541 MNPATSFTPSSPQNSPLDEGDSVPDPLECLQENPVPPFLSKTFDLVDDPSLDQIISWGSAGVSFVVWDPMEFSRHVLPRNFKHNNFSSFVRQLNTYVGIDFCNKPRKGCLSCRGFRKIDADKLEFFNEYFQRGKRHLLKNIQRRRAPPQSQQLGIYIGPSGDAAKPELEVEVEKLRRERSVLMQEVVELQQQQRTTVQHAREVNQRLQSAELRQKQMVSFLARFFQNPTLLACNKHEKEQRAIDSPRVRRKFVKHHQHQMGISGSLEEGQIVRYQPDWRNPVPVEQSPQYFSQGLARELNEGSKNLTSQVETSVSHELGAVHDAMPTSNIIGEGSSSIGLEDPLFKGKNVMSLNQEVVPEEYLVSFPDDLTKERGFPEFPFLGTENLNTSYNVSGSGLSSVNDPWGDHISHEVPGFGVTSGISDMWDMNSLHSAGNLASDEYPLGQPKDNRNKSIGP* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0352 457 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 24 443 IPR027725 -
Aev06g0352 457 SUPERFAMILY "Winged helix" DNA-binding domain 34 144 IPR036390 -
Aev06g0352 457 Coils Coil 165 192 - -
Aev06g0352 457 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-3 24 443 - -
Aev06g0352 457 SMART hsfneu3 34 144 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev06g0352 457 MobiDBLite consensus disorder prediction 437 457 - -
Aev06g0352 457 MobiDBLite consensus disorder prediction 1 26 - -
Aev06g0352 457 Gene3D - 30 145 IPR036388 -
Aev06g0352 457 Pfam HSF-type DNA-binding 38 144 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev06g0352 457 MobiDBLite consensus disorder prediction 1 18 - -
Aev06g0352 457 PRINTS Heat shock factor (HSF) domain signature 38 61 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev06g0352 457 PRINTS Heat shock factor (HSF) domain signature 89 101 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev06g0352 457 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0352 Aev-Chr6 2593859 2596107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0352 20 367 HSF AT5G03720 45.170 2.11e-86 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Aev06g0352 HSF_DNA-bind 2.4e-28 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0352 K09419 - gmx:100788429 455.677