Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0349 ATGGCGGAGCACTTGGCATCGATATTCGGGACGGAGAAGGACAGAGTGAACTGCCCCTTCTACTTCAAGATCGGGGCCTGCAGGCACGGCGACCGCTGCTCCAGGCTCCACACGAAGCCCACCATAAGCCCGACCCTTCTCCTCTCCAACATGTACCAGAGGCCCGACATGATCACCCCTCTCCTCCCTCCAAACCCTAACCAGCCCCAGTCTCAATCTCTTGACCCCGACAAGGTCCAGGACCACTTCGAGGACTTTTACGAAGATCTCTTCGAGGAGCTCAGCAAGTTGGAAATGTGTATGTTCAGTTTAAAGAGGAAGACCATGCTGCCAATGCCCTATGAATCTCATGGGAGTTTTATTCAGGTACCTTGTGCTCTGTCACATGGTCGGCCCATCATTGTTGACTTCTCCCCTGTTACGGATTTTCGAGAAGCTACTTGTAGGCAGTATGAGGAAAACGTTTGTAATCGAGGTGGCTACTGCAACTTTATGCACCTAAAGAAGATTAGCAGGGATTTGAGAAAGCGGTTATTTGGAAGAAACAGGCGTCACAATGGCCGCAGCAGAAGCAGAAGCAGAAGCCGTAGCCCTCCTAGGAGTCGCAACCATGAGGAGCGTTCACATGCTGGTCGTCATCCGGGTAGAAGAGATCATGACAGGTCTCATGGCCACCATGGTAGGAGGCCTAGAAGCCGTAGTCCTCGACATAGAGGAAGGCGAAGTAGAAGTCCAGCAGGCAGGGATAGGACTCCTGTCAGAGAAAGTAGTGCAGAAAGAAGAGCTAAAATAGAGCAGTGGAACAGGGAGAAGGAGCTGGGAGAATCTGGTAACCAGAACAATGCCAATGGCAATGGCAATGATTACGATGATCCAAGTGTCCCAAAAAATGGCAATGAATCTGGTAACCATGAGACATATCAGCAGAATAGTGATTCGGCCCAAGATTAA 951 0.5058 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLLLSNMYQRPDMITPLLPPNPNQPQSQSLDPDKVQDHFEDFYEDLFEELSKLEMCMFSLKRKTMLPMPYESHGSFIQVPCALSHGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRNRRHNGRSRSRSRSRSPPRSRNHEERSHAGRHPGRRDHDRSHGHHGRRPRSRSPRHRGRRSRSPAGRDRTPVRESSAERRAKIEQWNREKELGESGNQNNANGNGNDYDDPSVPKNGNESGNHETYQQNSDSAQD* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0349 316 MobiDBLite consensus disorder prediction 273 316 - -
Aev06g0349 316 MobiDBLite consensus disorder prediction 198 217 - -
Aev06g0349 316 MobiDBLite consensus disorder prediction 178 316 - -
Aev06g0349 316 MobiDBLite consensus disorder prediction 218 244 - -
Aev06g0349 316 PRINTS U2 auxiliary factor small subunit signature 159 171 IPR009145 GO:0000398|GO:0003723|GO:0089701
Aev06g0349 316 PRINTS U2 auxiliary factor small subunit signature 18 37 IPR009145 GO:0000398|GO:0003723|GO:0089701
Aev06g0349 316 PRINTS U2 auxiliary factor small subunit signature 124 148 IPR009145 GO:0000398|GO:0003723|GO:0089701
Aev06g0349 316 PRINTS U2 auxiliary factor small subunit signature 37 57 IPR009145 GO:0000398|GO:0003723|GO:0089701
Aev06g0349 316 ProSiteProfiles Zinc finger C3H1-type profile. 142 169 IPR000571 GO:0046872
Aev06g0349 316 ProSiteProfiles Zinc finger C3H1-type profile. 12 40 IPR000571 GO:0046872
Aev06g0349 316 PANTHER U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT 128 309 IPR009145 GO:0000398|GO:0003723|GO:0089701
Aev06g0349 316 PANTHER U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT 1 97 IPR009145 GO:0000398|GO:0003723|GO:0089701
Aev06g0349 316 PANTHER RNA RECOGNITION MOTIF DOMAIN, EUKARYOTE-RELATED 128 309 - -
Aev06g0349 316 PANTHER RNA RECOGNITION MOTIF DOMAIN, EUKARYOTE-RELATED 1 97 - -
Aev06g0349 316 MobiDBLite consensus disorder prediction 245 272 - -
Aev06g0349 316 MobiDBLite consensus disorder prediction 178 197 - -
Aev06g0349 316 SMART c3hfinal6 13 39 IPR000571 GO:0046872
Aev06g0349 316 SMART c3hfinal6 142 168 IPR000571 GO:0046872
Aev06g0349 316 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 144 167 IPR000571 GO:0046872
Aev06g0349 316 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 14 37 IPR000571 GO:0046872
Aev06g0349 316 MobiDBLite consensus disorder prediction 58 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0349 Aev-Chr6 2546028 2548012 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev06g0349 zf-CCCH 0.00032 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0349 K12836 - gmx:100811622 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0349 06 2546028 2548012 Aev06g0349 06 2546028 2548012 ECH