Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0336 ATGAATCAAGACATGGATTGGGATGAGAGCACAAGATCCTTTGTTCCTAGAGCACAACCTTCCTTAAACTTCCTCTATAACTATAACATGCCATATCCAGGAATGGAAGTGAAACAAGCAGAAATGTTGGAGACAACACCACATGGGTTGCTTATCAATCAGGCAATGGAGGAACTGAAGTATGGAAAGCAGAGGGAAAAGAAGAAGCGATTAACGAGCAAGCAGATAGAGTCACTGGAGAGGAGTTTCCAGGAGGAGATAAAGTTGGACACTGATAGGAAGATGAAGCTTTCAAGGGAACTAGGCCTCCAACCTCGCCAAATCGCAGTTTGGTTCCAGAACAGGCGTACAAGGTGGAAGGCTAAGCAGCTTGAACACTTGTACCTTTCCCTTAAACAACAATTTGACCACATCTCTCAGGAAAAGCACAACCTTCAACAAGAGGTTATGAAGCTGAAGGCAATGCTGAGAGAGCAAGGTCTTCGAACACAAATATCAGGTGGTGGTGGTGGTTATACGGAAATGTCAGGGAAAGAAACTGTAGAAAGCACCTCAGAGATGTTGCGTGGATCCAACAAGTCACGGGGAATGATTAATAATAACAATAACAATAATAATCAGATGATTGGAGATGGATATTGTTCTTTCACTGTGGATGATTACAGCACTGTTCCTCCACTCCCTCACTGGACTACTGTTCCGCACTGTCCTTAA 714 0.4356 MNQDMDWDESTRSFVPRAQPSLNFLYNYNMPYPGMEVKQAEMLETTPHGLLINQAMEELKYGKQREKKKRLTSKQIESLERSFQEEIKLDTDRKMKLSRELGLQPRQIAVWFQNRRTRWKAKQLEHLYLSLKQQFDHISQEKHNLQQEVMKLKAMLREQGLRTQISGGGGGYTEMSGKETVESTSEMLRGSNKSRGMINNNNNNNNQMIGDGYCSFTVDDYSTVPPLPHWTTVPHCP* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0336 237 CDD homeodomain 65 123 IPR001356 GO:0003677
Aev06g0336 237 Pfam Homeobox associated leucine zipper 122 156 IPR003106 GO:0006355|GO:0043565
Aev06g0336 237 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 5 232 IPR045224 GO:0003700
Aev06g0336 237 Pfam Homeodomain 65 120 IPR001356 GO:0003677
Aev06g0336 237 ProSitePatterns 'Homeobox' domain signature. 97 120 IPR017970 GO:0000981|GO:0006355
Aev06g0336 237 ProSiteProfiles 'Homeobox' domain profile. 62 122 IPR001356 GO:0003677
Aev06g0336 237 Coils Coil 128 155 - -
Aev06g0336 237 Gene3D - 27 123 - -
Aev06g0336 237 PRINTS Lambda-repressor HTH signature 93 102 IPR000047 GO:0003677
Aev06g0336 237 PRINTS Lambda-repressor HTH signature 102 118 IPR000047 GO:0003677
Aev06g0336 237 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 5 232 - -
Aev06g0336 237 SUPERFAMILY Homeodomain-like 52 124 IPR009057 -
Aev06g0336 237 SMART HOX_1 64 126 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0336 Aev-Chr6 2453373 2454575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0336 5 152 Homeobox Transcription Factor Family AT5G03790 50.617 7.55e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev06g0336 Homeodomain 3.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0336 - - gmx:100778007 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g2220 02 23285235 23287517 Aev06g0336 06 2453373 2454575 PCT