Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0335 ATGGTCCTCAAGACGGAGCTATGCCGTTTCAGTGGCGCCAAGATCTACCCAGGCAAAGGAATCAGATTTATCCGTAGTGATTCTCAGGTGTTTCTGTTTGCCAACTCAAAATGCAAAAGGTATTTCCACAATCGTCTGAAGCCATCAAAGCTTACATGGACTGCCATGTATAGGAAGCAGCACAAGAAGGACATTTCTCAAGAAGCCGTGAAGAAGAAGCGCCGAGCTACCAAGAAGCCTTACTCTAGGTCAATTGTTGGTGCTACTTTGGAAGTCATCCAGAAAAGAAGAACTGAGAAGCCTGAAGTTCGAGATGCAGCCAGAGAAGCTGCCCTTCGTGAAATTAAGGAAAGGATCAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAGGCAGAGGTAGCAGCCAAGTCGCAAAAATCACAGGGCAAGGGCAATGTTTCAAAGGGTGCTGCACCCAAAGGTCCCAAGCTTGGTGGTGGAGGCGGGAAACGCTGA 495 0.4747 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDISQEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVAAKSQKSQGKGNVSKGAAPKGPKLGGGGGKR* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0335 164 MobiDBLite consensus disorder prediction 117 136 - -
Aev06g0335 164 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Aev06g0335 164 PANTHER 60S RIBOSOMAL PROTEIN L24 1 164 IPR000988 -
Aev06g0335 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Aev06g0335 164 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Aev06g0335 164 MobiDBLite consensus disorder prediction 117 164 - -
Aev06g0335 164 MobiDBLite consensus disorder prediction 64 83 - -
Aev06g0335 164 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Aev06g0335 164 PANTHER 60S RIBOSOMAL PROTEIN L24 1 164 - -
Aev06g0335 164 Coils Coil 112 139 - -
Aev06g0335 164 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Aev06g0335 164 Gene3D - 69 141 - -
Aev06g0335 164 SMART 4TRASH 8 46 IPR011017 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0335 Aev-Chr6 2450751 2452471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0335 1 157 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 85.987 6.62e-89 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0335 K02896 - gmx:100499884 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0335 06 2450751 2452471 Aev02g2221 02 23297642 23300504 PCT