Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0329 ATGATGGACGCCAAAACGACGACGGAAAACAAGAGCTTGCTCAATGAAGCAAAGGAAGAAACGACACCCACCAACCCTTCGTCGTCGTCGTTAAACGACCCCGAAGAGTCGAGCATTGAAGCGGTTACCTCCGGTGACACTCCCTACACTTCGGCCTCAACATTCGAAGAGCTCAACCTCTCCCAAGAGCTTCTCAAGGGCCTCTACGTCGAGATGAAGTTCCAAAAGCCCAGCAAGATCCAGGCCGTTACTCTCCCTTTGATCTTGACCCCTCCCTTCAAAGACTTGATAGCCCAGGCCCATAACGGCTCCGGCAAGACCACCTGTTTCGTTCTCGGCATGCTGACCCGGGTCGACCCGAATGTTCTCGGGCCCCAGGCACTCTGCATTTGCCCCACCCGGGAGCTTGCGGTTCAGAACGCCGACGTCCTCCGGAGGATGGCCAAGTACACCGGGATCACCTCCGAGTGCGCCCTTCCGCTGGACACCAGGGGCGCGCCCCGTGTGTCGTCGCCAATGTCGCCGCCGCCGGTCATGGCTCAGGTGGTGGTTGGGACTCCCGGTACAACCAGGAAGTGGATATTGAACAAGAAGCTGAGAGTTACAAGGTTGAAGATTCTTGTGTTTGATGAGGCCGATCAAATGCTCGCCGAGGATGGTTTTAAAGATGATTCCATGAGGATTACGAATCGAATTAAATCAGATAGTCCTGATTGCCAGGTTGTCCTGTTTTCAGCTACGTTCAATGACACTGTAAGGAGTTTTGTTTCAAAGATAGTTAAGGAAGGTTATAATCAACTTTTGGTGAAGAAGGAAGAATTATCATTGAAGGCGGTGAAGCAATACAGAGTGAATTGTCCTGATGAAGTGTCCAAGATCGAAGTGATAAGAGATTACATATTCGAAATAGGAGAGAATGTTGGGCAAACCATTATATTCGTGCGAAGAAGGGAAAGTGCAAGCATGTTGCATAGGTCGCTCACAGAAATGGGGTATGAGGTGAGTTCCATACAAGGCACTCTTTCACATGAAGAGAGAGACAAGATTGTGAAGGAGTTCAGAGATGGTTTGACTCAAGTTCTTATATCAACTGATCTTCTTGCTCGAGGCTTTGATCAGCAACAGATTAATTTGGTTGTCAACTATGATCTCCCAGTGAAGCGTGCACGTGAACAGGATCCCGATTACGAGGTGTATTTGCACAGGGTTGGTAGGGCTGGACGCTTCGGCCGTAAGGGTGCTGTTTTTAACCTGATATGCGGCACAGAAGATGAAAATCTCATGTCAAAGATTGAGAATCACTTTGGCACTCAAGTAAATGAGGTCCGATTAAACAACATTGAAGATTACAAACGCGCTCTTAAGGAGACTGGTTTACTGCAATGA 1386 0.4877 MMDAKTTTENKSLLNEAKEETTPTNPSSSSLNDPEESSIEAVTSGDTPYTSASTFEELNLSQELLKGLYVEMKFQKPSKIQAVTLPLILTPPFKDLIAQAHNGSGKTTCFVLGMLTRVDPNVLGPQALCICPTRELAVQNADVLRRMAKYTGITSECALPLDTRGAPRVSSPMSPPPVMAQVVVGTPGTTRKWILNKKLRVTRLKILVFDEADQMLAEDGFKDDSMRITNRIKSDSPDCQVVLFSATFNDTVRSFVSKIVKEGYNQLLVKKEELSLKAVKQYRVNCPDEVSKIEVIRDYIFEIGENVGQTIIFVRRRESASMLHRSLTEMGYEVSSIQGTLSHEERDKIVKEFRDGLTQVLISTDLLARGFDQQQINLVVNYDLPVKRAREQDPDYEVYLHRVGRAGRFGRKGAVFNLICGTEDENLMSKIENHFGTQVNEVRLNNIEDYKRALKETGLLQ* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0329 461 SMART ultradead3 73 282 IPR014001 -
Aev06g0329 461 Gene3D - 33 273 IPR027417 -
Aev06g0329 461 PANTHER DEAD-BOX HELICASE DBP80 32 441 - -
Aev06g0329 461 CDD SF2_C_DEAD 279 419 - -
Aev06g0329 461 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 295 450 IPR001650 -
Aev06g0329 461 MobiDBLite consensus disorder prediction 1 50 - -
Aev06g0329 461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 428 IPR027417 -
Aev06g0329 461 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 87 266 IPR014001 -
Aev06g0329 461 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 53 82 IPR014014 GO:0003724
Aev06g0329 461 CDD DEADc_DDX19_DDX25 60 261 - -
Aev06g0329 461 Pfam Helicase conserved C-terminal domain 292 410 IPR001650 -
Aev06g0329 461 Pfam DEAD/DEAH box helicase 79 253 IPR011545 GO:0003676|GO:0005524
Aev06g0329 461 SMART helicmild6 321 410 IPR001650 -
Aev06g0329 461 Gene3D - 277 454 IPR027417 -
Aev06g0329 461 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 32 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0329 Aev-Chr6 2417882 2419880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0329 43 445 Eukaryotic Initiation Factors Gene Family AT3G19760 35.484 8.84e-72 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0329 K18655 - gmx:100778091 633.254