Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0324 ATGATCAAAATGCACAATGGAGCCCCAGCCTCAGTAGATTCCTATGTCATCCCTCTTGTTATCTCCGCTGTTGGAATAGTCTTCACTATTCTCACACTTTCATCCTTCTTTTTCATTTTCTGGTGGCATTACCTTCGGTCTCATCAATCCCCTCATTCCACCACCAAGAATAATTCCAAAGGGGTCCCAAAGGAAATCCTCAGCAAGATTCGAATCATCTCATATTTATCACCACAGGAAAAGAAGGAGTATGATGATTGGGTCCAGAATGAGTGTTCAATTTGCCTAGGCCAATACGAGGAAGAGGAGGAGCTAAGAGTGTTGCCTAATTGTAGCCACGCATTCCATGTCCCCTGCATTGATGCATGGTTCGAGGAACACACAAACTGCCCAATTTGCCGCTCACCAATCGACTCTGAATGTTGTGAATCATCATCATCAACATTTTTGCCAACAGATTCTTCAGAAAGCAGTGTCCAAGAACAAAGGGTATTTCATGTAATTCCAATTGACAGTGATGAATCAACATTGGAGAGCAATGAGTTTGAAGGAGTGCACCCTGTTTTGGATCGACACTCTCACTCTCACTCTCACTCTCACTCATGTTGTCACCACATGAAGAAGAAACCGCGATTGTTGGGGACGAGGTTGAAGAGGTCCTTGTCATTGGATCAATTGTCTTTATATGTTGCTGTTAACGTACAAAGAGAACAAGAACAAGAACAGGAACAGGCTTCAGCTTCTTCTTCTTCTTCTTCTATTTCTAATTCTAAATGGGTTATGACGATGAATCGGTACAAATCCAAGTCACTGAAGCATGTGCTCATGAGATCATTCTCGCAATGTACACATTTCAGTGACATTCTTCCCAATTGA 876 0.4235 MIKMHNGAPASVDSYVIPLVISAVGIVFTILTLSSFFFIFWWHYLRSHQSPHSTTKNNSKGVPKEILSKIRIISYLSPQEKKEYDDWVQNECSICLGQYEEEEELRVLPNCSHAFHVPCIDAWFEEHTNCPICRSPIDSECCESSSSTFLPTDSSESSVQEQRVFHVIPIDSDESTLESNEFEGVHPVLDRHSHSHSHSHSCCHHMKKKPRLLGTRLKRSLSLDQLSLYVAVNVQREQEQEQEQASASSSSSSISNSKWVMTMNRYKSKSLKHVLMRSFSQCTHFSDILPN* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0324 291 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 140 IPR013083 -
Aev06g0324 291 SMART ring_2 92 133 IPR001841 -
Aev06g0324 291 SUPERFAMILY RING/U-box 91 139 - -
Aev06g0324 291 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 13 281 IPR044675 -
Aev06g0324 291 PANTHER RING-H2 FINGER PROTEIN ATL73-LIKE 13 281 - -
Aev06g0324 291 Pfam Ring finger domain 90 134 IPR001841 -
Aev06g0324 291 ProSiteProfiles Zinc finger RING-type profile. 92 134 IPR001841 -
Aev06g0324 291 CDD RING-H2_PA-TM-RING 91 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0324 Aev-Chr6 2404560 2405435 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0324 21 135 C3H Transcription Factor Family AT5G17600 34.586 1.24e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0324 - - aip:107626991 174.481