Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0321 ATGGAGTCTACCAAAGTGCTGAATTCGCCGCCGATGGATCAGCCTCCTGTCGTTCCAGCTCCAATGGCGGATTCTGATATCGGCCGTAGCTGCAGCAAGGCGAGCAAAGTTTCTGTGGTGAACGGTTACATTGTTTATACGAGAGCTAACAAGAGGCACCGGAATTTGTGTAACGGAGGTTCTGAGAGCGAGGAATTAAAGAGGTTCAAAGCCTATGAAAATGCGGAAGCAAATGCAGAGCTTCCAGCTAAAGTTGAGAACGGAGCGGAATGCTGCGCGGGAAGGGAAAACGACAGCAACGAGCTGAAACGCGAGCTCAAAGAGGTTTCTAATAATGTCGTGGCTAGGAGGACATTTTCGAGGCGAACATCACCGAGACTGAAAGCGAATGTCGTTTCAAATGCTGAACCTGATGGTCATGGTGAGTTGGATGGTTCAGTGAGCGGAATATCGAGGAGCAAGATGGAAATGAAGATGTCGAAGAAGATTGTGGTCAACAAGAAGCCGATGACCGTGAAGGAGCTTTTCCGCACGGGTTTACTTGATGGAGTATCGGTGGTTTACATGGGCGGCATTAATAAGGCTTCAGGATTACGGGGTGTTATTAGAGATGGGGGAATATCGTGTTCATGCTGTCTTTGCAATGGACGCAGGATTATTCCGCCTTCCCAGTTCGAGATCCATGCTTGCAAACGATATAGGAGAGCAACAGAGTATATTTGCCTTGAAAATGGGAAGAACCTGCTTGATCTGTTGAAAGAATGCAGGGGAGCTCCCCTGCATTCTTTGGAGGCGACAGTTCAAAACTTCGTTTGTTCTCCACCTCAAGAAAAATGTTTTACTTGTAAAAGGTGCAAAGGATATTTCCCTTCTTCATGTGTGGCAAAAGTGGGGCCCCTATGCCGTTATTGTGTGGAGTCAAGTAAATTAGAACACAGTTCTAGTGTCGCAGTCAGCAAAAGAGTCAGGTCTCCTAGACCAGTGTCGGTCTCCAATCCATCCAGTACTTCTGAGCTGTCTATATCTTCACAAAATAAGAGACACAAGAATAAAAGGACAAGGTCATCAGAACGGGTCAGCAGCTCCAATTCTTCCAAGAGTGCTTCTGTGCCTATTCTACCAAAGAAGAAAAACAAACTGTTGACGGCAAAAAAGAAGTCACTGTCAGGAAAGTTGAAGACCCGAAACATTACTTCAAATTCAAAGTGTTCATCTCCACAAAATAAAAATCAATGGAGAATAACTAAGAAGGATCAGCGGTTGCATAAGTTAGTTTTTGAAGAAAATGGATTACCAGATGGTACTGAAGTCGCTTATTATGCCCGTGGACAGAAATTGCTTGAAGGCTTCAAAATGGGCTCTGGAATTGTATGTCGATGCTGCAATACTGAGGTCAGCCCCTCACAGTTTGAGGCCCATGCAGGATGGGCTTCTCGCAAGAAACCTTATGCGTACATCTACACATCAAATGGGGTGTCTCTCCATGAATTTGCAATATCTCTCTCAAAAGATCGAAAATACTCTGCAACTGATAATGATGATCTATGCGTTGTTTGTTGGGATGGTGGAAATCTGTTGCTTTGTGATGGATGCCCAAGAGCATTTCATAAAGAATGTGCATCTCTAAAGAGTATTCCGCGTGGTGACTGGTACTGTCAATTTTGCCAAAACATGTTCCAGAGAGAAAAGTTCGTGGCATACAATGCCAATGCTATGGCAGCTGGAAGGGTAGAAGGAGTTGATCCTATTGAGCAGATAACCAATAGATGCATCCGTATAGTAGAAGACATTGAAGCTGAGCTTAGTGCATGTGCTTTATGCGGGGGTGTCGACTTCAGCAGATCTGGATTTGGTCCCCGCACAATAATACTTTGCGACCAGTGTGAAAAGGAATATCATGTTGGATGTTTGAGGGATCATAAGATGGCATATTTGAAGGAACTTCCAGAGGGAAAGTGGCTTTGTTGTAATGATTGCACAAGAATACATTCTACTTTGGAGAACCTTTTGGTTAGGGGTGCTGAGAGACTCCCTGAATCTCTGCTGGGCGTTATAAAAAAGAAGCAAGAGAAAAAGGGGTTAGAACCTCTCAATGTTATTGATGTAAGATGGAGGGTTCTTAATGGCAAAATTGCTTCTCCTGAAACTAGACCATTGCTTTTGGAGGCTGTTTCAATCTTTCATGAATGTTTTAACCCTATAGTTGATGCAGTTAGCGGCCGTGACCTTATTCCAGCCATGGTTTATGGAAGGAATGTTCGGGGGCAGGAGTTTGGAGGAATGTATTGTGCATTGTTAATGGTCAATTCATCTGTGGTATCTGCGGGCATGCTTCGAATTTTTGGCACAGATGTTGCTGAGCTGCCCTTAGTCGCAACAAGTAACAAGGACCATGGAAAGGGCTACTTCCAAACTCTATTCTCTTGCATTGAGAGGCTGCTGGCTTTCTTAAATGTGAAGAACCTTGTTCTACCAGCTGCTGAAGAAGCAGAATCCATATGGACAGATAAATTTGGGTTTCGCAAGATGATACCGGACCAGGCAGCTGCATCGCTTATCGCAATACTTCGTTGTGCTGCAGCTTACCAGTTATAG 2595 0.4439 MESTKVLNSPPMDQPPVVPAPMADSDIGRSCSKASKVSVVNGYIVYTRANKRHRNLCNGGSESEELKRFKAYENAEANAELPAKVENGAECCAGRENDSNELKRELKEVSNNVVARRTFSRRTSPRLKANVVSNAEPDGHGELDGSVSGISRSKMEMKMSKKIVVNKKPMTVKELFRTGLLDGVSVVYMGGINKASGLRGVIRDGGISCSCCLCNGRRIIPPSQFEIHACKRYRRATEYICLENGKNLLDLLKECRGAPLHSLEATVQNFVCSPPQEKCFTCKRCKGYFPSSCVAKVGPLCRYCVESSKLEHSSSVAVSKRVRSPRPVSVSNPSSTSELSISSQNKRHKNKRTRSSERVSSSNSSKSASVPILPKKKNKLLTAKKKSLSGKLKTRNITSNSKCSSPQNKNQWRITKKDQRLHKLVFEENGLPDGTEVAYYARGQKLLEGFKMGSGIVCRCCNTEVSPSQFEAHAGWASRKKPYAYIYTSNGVSLHEFAISLSKDRKYSATDNDDLCVVCWDGGNLLLCDGCPRAFHKECASLKSIPRGDWYCQFCQNMFQREKFVAYNANAMAAGRVEGVDPIEQITNRCIRIVEDIEAELSACALCGGVDFSRSGFGPRTIILCDQCEKEYHVGCLRDHKMAYLKELPEGKWLCCNDCTRIHSTLENLLVRGAERLPESLLGVIKKKQEKKGLEPLNVIDVRWRVLNGKIASPETRPLLLEAVSIFHECFNPIVDAVSGRDLIPAMVYGRNVRGQEFGGMYCALLMVNSSVVSAGMLRIFGTDVAELPLVATSNKDHGKGYFQTLFSCIERLLAFLNVKNLVLPAAEEAESIWTDKFGFRKMIPDQAAASLIAILRCAAAYQL* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0321 864 ProSiteProfiles Zinc finger PHD-type profile. 513 558 IPR019787 -
Aev06g0321 864 SUPERFAMILY FYVE/PHD zinc finger 502 561 IPR011011 -
Aev06g0321 864 MobiDBLite consensus disorder prediction 392 410 - -
Aev06g0321 864 Coils Coil 92 112 - -
Aev06g0321 864 PANTHER AUTOIMMUNE REGULATOR 33 848 - -
Aev06g0321 864 SMART PHD_3 603 660 IPR001965 -
Aev06g0321 864 SMART PHD_3 515 556 IPR001965 -
Aev06g0321 864 Pfam PHD-finger 516 557 IPR019787 -
Aev06g0321 864 SUPERFAMILY FYVE/PHD zinc finger 593 657 IPR011011 -
Aev06g0321 864 MobiDBLite consensus disorder prediction 1 24 - -
Aev06g0321 864 MobiDBLite consensus disorder prediction 315 343 - -
Aev06g0321 864 CDD PHD1_AIRE 515 555 - -
Aev06g0321 864 MobiDBLite consensus disorder prediction 315 410 - -
Aev06g0321 864 Pfam Tify domain binding domain 200 255 IPR032308 -
Aev06g0321 864 Pfam Tify domain binding domain 453 497 IPR032308 -
Aev06g0321 864 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 33 848 - -
Aev06g0321 864 MobiDBLite consensus disorder prediction 357 371 - -
Aev06g0321 864 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 599 662 IPR013083 -
Aev06g0321 864 ProSitePatterns Zinc finger PHD-type signature. 516 555 IPR019786 -
Aev06g0321 864 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 501 590 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0321 Aev-Chr6 2374447 2380825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0321 130 847 PHD Transcription Factor Family AT2G36720 52.997 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev06g0321 TDBD 3.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0321 - - gmx:100802562 1214.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0321 06 2374447 2380825 Aev02g2244 02 23483600 23492320 PCT