Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev06g0301 | ATGCGGCAGCAGATTGTTGAAGAGGAGCGTAGTGTGGACCCCAACATGAGGATGAGGATTATGCAACAAATCATGAATAAGGGAAGACGCACAAAGCGCCAGAGGCTGACGACGACGACAATACCCCTTTTGCCCTCACCCTCCAACGACGATGAGGACATGGCCAATTGTTTGATCCTCTTGGCACAGGGCCATTACAACAATAAAGCATCAAAATCATCACATTTGGCCTCACCTAATAATAACAGCAACAACAAGGTTGCATCATCAGGGTTGTACCTTTATGAATGCAAGACATGTAACAGGTGCTTCCCTTCATTTCAAGCACTTGGTGGCCACAGAGCAAGCCACAAGAAACCAATTAAGACACTCAACAATGATGGCGTCATTATTGCAGAGGATCATCATACTTGTTCTACTTCGTCTTTTGTGAATAATGATGATATTATTGTTGATCATCATAGCTATTATGGGCCCACAACAAGTACCGCCCTCACCTTACAAATGCCAAACAGGGGGGGTACTGTGTCTACTCCCACTCCCAAATCAAAGAATAATAAGGTTCATGAGTGTTCAATTTGTGGGGCAGAGTTCTCATCAGGCCAAGCCTTGGGGGGACACATGAGGAGGCACAGGGCTTTCTTCTCCATTTCTTCTTCTGCACCAACAACTACTTCTTCATCTATCAGTCTTCATGAATCATCTTATTCTCAAGATCATCAGGACGCCAAGAATAATAATAATAATAATAATAATAGTGTTCTGAAGCTTGATTTGAATCTTCCTGCTGCACCTGAAGATCATCATCATCATCATCATAGGGAATCCAACAAGTTTACTTTTCAGTCCAAAGAGAAAGTTATTGTCTTCTCTCCTGCAACTTCCTTGGTGGATTGCCATTACTAG | 906 | 0.4283 | MRQQIVEEERSVDPNMRMRIMQQIMNKGRRTKRQRLTTTTIPLLPSPSNDDEDMANCLILLAQGHYNNKASKSSHLASPNNNSNNKVASSGLYLYECKTCNRCFPSFQALGGHRASHKKPIKTLNNDGVIIAEDHHTCSTSSFVNNDDIIVDHHSYYGPTTSTALTLQMPNRGGTVSTPTPKSKNNKVHECSICGAEFSSGQALGGHMRRHRAFFSISSSAPTTTSSSISLHESSYSQDHQDAKNNNNNNNNSVLKLDLNLPAAPEDHHHHHHRESNKFTFQSKEKVIVFSPATSLVDCHY* | 302 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev06g0301 | 301 | PANTHER | GATA ZINC FINGER DOMAIN-CONTAINING PROTEIN 15-LIKE | 44 | 301 | - | - | |
Aev06g0301 | 301 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 97 | 117 | IPR013087 | - | |
Aev06g0301 | 301 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 44 | 301 | - | - | |
Aev06g0301 | 301 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 189 | 211 | IPR013087 | - | |
Aev06g0301 | 301 | MobiDBLite | consensus disorder prediction | 220 | 255 | - | - | |
Aev06g0301 | 301 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 191 | 211 | IPR013087 | - | |
Aev06g0301 | 301 | Pfam | C2H2-type zinc finger | 95 | 120 | - | - | |
Aev06g0301 | 301 | Pfam | C2H2-type zinc finger | 188 | 213 | - | - | |
Aev06g0301 | 301 | SMART | c2h2final6 | 95 | 117 | IPR013087 | - | |
Aev06g0301 | 301 | SMART | c2h2final6 | 189 | 211 | IPR013087 | - | |
Aev06g0301 | 301 | Gene3D | Classic Zinc Finger | 171 | 253 | - | - | |
Aev06g0301 | 301 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 95 | 117 | IPR013087 | - | |
Aev06g0301 | 301 | SUPERFAMILY | beta-beta-alpha zinc fingers | 94 | 211 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev06g0301 | Aev-Chr6 | 2258507 | 2259412 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev06g0301 | 24 | 301 | C2H2 Transcription Factor Family | AT5G03510 | 37.380 | 5.27e-47 | 158 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Aev06g0301 | zf-C2H2_6 | 6.9e-13 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev06g0301 | - | - | adu:107494043 | 218.394 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev06g0301 | 06 | 2258507 | 2259412 | Aev09g1850 | 09 | 22080825 | 22081895 | ECH | |
Aev06g0301 | 06 | 2258507 | 2259412 | Aev06g0301 | 06 | 2258507 | 2259412 | ECH | |
Aev06g0301 | 06 | 2258507 | 2259412 | Aev10g1955 | 10 | 20909311 | 20910318 | ECH | |
Aev06g0301 | 06 | 2258507 | 2259412 | Aev04g2933 | 04 | 29092315 | 29093430 | ECH |