Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0288 ATGGCGAGTCCCTACGACCACCACGACTACGAAATTCCACCGCCACACTTCACCGGAAGTGCTGCCGATTTCGGACTCAGCGATGACGACGAAACAACCGAAGAAGAAGATGACGACGAAGAGGATGAGGAGGAGGAGGAAGATGAGGACGGAGAGTACTCGCCTAGAGCTCCGCGTGAAGGTCCTTCCACAGCCTCTAATCAACCAATCGTTATCCCCGACGAATCGCTGAACGAGATCGGAGAATTAGAAGAAGGAGGAGATGGCGGAGACAACAAGCGCCGCAGAATCGAAGGCGGAGAAGCTTCGTGTTCGTCGTTGGGAATTGACGGAAGCCAAGGAAACGAGTGGAACCGCACCGACATTGACGGCCTCTTCTGCCCTATTTGCATGGAAGCTTGGACCGATGACGGCGACCACAATATATGCTGTCTTCCTTGTGGACACATATATGGTATGTCTTGCATCAAGAAATGGCTTCAACAACAGAAAAGATCCGGGAAGTGTCCTCAGTGCAATAGGAAATGCTCATTAAGGGATGTGAGGAAGCTCTATGCCTCGCGAGTAGTTACTGTAGATGAAGAATCTCAGAAGAAAATTCGGTCACTTGAGGCCAAGTGTGCTGCCCTTGAAAGTAAGGGCGCTGATTGGCACAAAAAAGAATCTCAATGGAGGAAGAGAGAAGCTGCTTTGCATCTTGTAGTTCAGAAGCTTACAAAGAGAAACACTTTTTTGGAGAAGTTGCTGCTGGATATGCAGAGCAGGCAATCTGGCTTGATAAATGGCAATAGGAATTATCATTGGAGATCTCAATATGAGAACAACTTCGGCTTAAAGTCCCATGGAAATGGATCTTTTTGCAATTTTGAGTTACAGCAAACGTTTCATCTGGATGGTGCACGTGTTTTTGATTTGGATGCTTCTAATCAAATTTTATTAGTTGCACAAAAGCCAAGGGGGATTGGTGGGGCACACTTCCTAAGTAAAATGAGCTTGATACATCCATTCGAGATGGAAGATATCTTACTGCCTTCCACTACAACTGGTATTAGAGATATACATTTTTCTCCATCTAATAGTAGGCTGGCCCTCTATGCTTCATTAGAGAAGAAGTTATCAGTGCTCAGCATGGAGAGCAACAATCCTGTTCTCAGTTATGATCTACAGGATCCTGCTTGGTCATGTTCATGGGATTGCAATAGTTCACATTACATGTATGCTGGACTTCAGAATGGTTCTGTCTTGGTGTTTGATATGCGACAAACTGCAGCGCCCGTGAAGTCTTTAATTGGGTTGACTAGCAACCCTGTTCATTCTGTACATTCTCTTGCACAAACTACAAGTCCTCCTTCTGCTGTTAACACCATCTTATCCGCATCTGCAATTGGCCTTTGTCAGTGGAATGTTGATTCTGAAGAACGGCCATCTGTGGTTCCTGAAACTGATAATCAAGGAGTTTGTATATCCCTTGCCTATTGCCCTAGCAGTGATGACATTGTTGTTTCATACCGTCCAAAATTTGACATGTCACTTGATGTGCCACTTTCTCAAACATCACCGACTCCTTCTCAATCTACTGGACAAGGAGTAGTAGGCTCTCATATCTTATTGAAGAGGCAGGGCAGTGATCATTTCCAAAAGATGGGTTCCTCATATGCCAATCTAAGTAAAATTCGACTACCTAAATGTGTAATTATAGACAAAGAGAATCAAAGCAGAATTTTTGCAGCTGGAGATGAAGTTACATGTGAATTGGTTTTGCATGAGCTGCCATCATTTAGAGTTCTTCAGCATGTCAAATTGCCAGCTCAGGCCCGTGATGTTAGGTACTCACCTAGCCATGGAATTCTTGGTTGTTTAACTGAGAAAACATTGCAACTTTTCCATACCAAACTCTCGTGA 1902 0.4437 MASPYDHHDYEIPPPHFTGSAADFGLSDDDETTEEEDDDEEDEEEEEDEDGEYSPRAPREGPSTASNQPIVIPDESLNEIGELEEGGDGGDNKRRRIEGGEASCSSLGIDGSQGNEWNRTDIDGLFCPICMEAWTDDGDHNICCLPCGHIYGMSCIKKWLQQQKRSGKCPQCNRKCSLRDVRKLYASRVVTVDEESQKKIRSLEAKCAALESKGADWHKKESQWRKREAALHLVVQKLTKRNTFLEKLLLDMQSRQSGLINGNRNYHWRSQYENNFGLKSHGNGSFCNFELQQTFHLDGARVFDLDASNQILLVAQKPRGIGGAHFLSKMSLIHPFEMEDILLPSTTTGIRDIHFSPSNSRLALYASLEKKLSVLSMESNNPVLSYDLQDPAWSCSWDCNSSHYMYAGLQNGSVLVFDMRQTAAPVKSLIGLTSNPVHSVHSLAQTTSPPSAVNTILSASAIGLCQWNVDSEERPSVVPETDNQGVCISLAYCPSSDDIVVSYRPKFDMSLDVPLSQTSPTPSQSTGQGVVGSHILLKRQGSDHFQKMGSSYANLSKIRLPKCVIIDKENQSRIFAAGDEVTCELVLHELPSFRVLQHVKLPAQARDVRYSPSHGILGCLTEKTLQLFHTKLS* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0288 633 Gene3D - 300 513 IPR015943 GO:0005515
Aev06g0288 633 SMART ring_2 127 172 IPR001841 -
Aev06g0288 633 MobiDBLite consensus disorder prediction 1 97 - -
Aev06g0288 633 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 236 IPR013083 -
Aev06g0288 633 PANTHER RFWD3 PROTEIN 30 628 IPR037381 GO:0004842|GO:0005634|GO:0016567|GO:0036297
Aev06g0288 633 SUPERFAMILY RING/U-box 118 178 - -
Aev06g0288 633 MobiDBLite consensus disorder prediction 27 51 - -
Aev06g0288 633 CDD mRING-C3HGC3_RFWD3 123 173 - -
Aev06g0288 633 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 30 628 - -
Aev06g0288 633 Coils Coil 193 213 - -
Aev06g0288 633 ProSiteProfiles Zinc finger RING-type profile. 127 173 IPR001841 -
Aev06g0288 633 SUPERFAMILY WD40 repeat-like 288 502 IPR036322 GO:0005515
Aev06g0288 633 Pfam Ring finger domain 127 173 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0288 126 178 C3H Transcription Factor Family AT1G51930 44.444 4.76e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0288 K15691 - gmx:100818898 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0288 06 2169217 2174629 Aev06g0288 06 2169217 2174629 ECH