Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0283 ATGATGAAGAAATTAGGCGAAGAAATGAATATGATGAGTCCAATACATGTATGCTCTGAAGATTCAAAGAGGGATTGTGTGTGTGAGAAAGCTAAGATAGAGATGGGTAGAGCTCCTTGCTGTGATAAGGCTAATGTGAAAAAGGGGCCATGGTCTCCTGAAGAAGATGCAAAGCTAAAAGAGTACATAGACAAACATGGAACTGGTGGCAATTGGATTGCCCTGCCCCAGAAAGTTGGTTTGAAAAGATGTGGTAAGAGTTGTAGGCTAAGATGGCTTAATTATCTGAGACCCAACATTAAGCATGGAGAGTTCTCTGAAGCAGAGGATAGAGTTATCTGCAGCCTCTATGCTACCATTGGAAGCAGCTCCTCTGATGGAAGCATCAATAACAACAACCAGATGAATAGTCATGTGATGGAGGCAGAGTTGGGTGATAATGGAGGTTTTGTTGATCAGATAAGTGTGGCTAATTATCTCTACAGTGGTGGTGTAGGTGTAGAAGATGCTCAGAAATTGATGCAATCCTCATCCAATGGATTATTGTGGGGTGAAAATCCAATGGATTATGGTCTAGAAGAAATCAAGGAGCTAATAAGCAGTACTAGTACTTGCAACAACTTTTTGTTTGATCAAAAGAAGACAGAGGAAAGTGTCATCATGTACTACTGA 672 0.4077 MMKKLGEEMNMMSPIHVCSEDSKRDCVCEKAKIEMGRAPCCDKANVKKGPWSPEEDAKLKEYIDKHGTGGNWIALPQKVGLKRCGKSCRLRWLNYLRPNIKHGEFSEAEDRVICSLYATIGSSSSDGSINNNNQMNSHVMEAELGDNGGFVDQISVANYLYSGGVGVEDAQKLMQSSSNGLLWGENPMDYGLEEIKELISSTSTCNNFLFDQKKTEESVIMYY* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0283 223 SMART sant 47 98 IPR001005 -
Aev06g0283 223 Gene3D - 41 102 - -
Aev06g0283 223 PANTHER TRANSCRIPTION FACTOR RAX1 35 124 - -
Aev06g0283 223 PANTHER TRANSCRIPTION FACTOR RAX1 124 223 - -
Aev06g0283 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 100 IPR017930 -
Aev06g0283 223 ProSiteProfiles Myb-like domain profile. 43 96 IPR001005 -
Aev06g0283 223 Pfam Myb-like DNA-binding domain 48 96 IPR001005 -
Aev06g0283 223 SUPERFAMILY Homeodomain-like 49 122 IPR009057 -
Aev06g0283 223 PANTHER OS09G0431300 PROTEIN 35 124 - -
Aev06g0283 223 PANTHER OS09G0431300 PROTEIN 124 223 - -
Aev06g0283 223 CDD SANT 50 96 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0283 Aev-Chr6 2131361 2134188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0283 35 122 MYB Transcription Factor Family AT5G57620 88.636 5.22e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev06g0283 Myb_DNA-binding 3.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0283 K09422 - csv:101203486 183.726