Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0262 ATGGAATCAATCACCATGACCAACGGCCACCACAACAACCACAAATCCCAAAATGGCACATTCTGTTTGCCAAGCAAAACCGCCACTAACGGTAATGTTGTTGGCAGCAGTGATCCATTGAATTGGGGAGTGGCGGCGGACTCACTCAAGGGGAGCCACCTGGACGAGGTGAAGCGCATGGTGGCCGAGTACCGGAAGCCGGTGGTGAAGCTCGGCGGCGAGACTCTGACGATATCTCAGGTGGCGGCGATCGCGGCCCACGACCAGGGTGTGAGGGTGGTGCTGTCGGAGTCGGCGAGGGCTGGCGTTAAGGCCAGCAGTGACTGGGTCATGGACAGCATGAACAACGGTACTGACAGTTACGGTGTCACCACTGGATTCGGCGCCACTTCTCATCGCCGAACCAAACAGGGTGGTGCTCTTCAGAAAGAGCTCATCAGGTTCTTGAATGCTGGAATATTTGGGAATGGAACAGAGTCGAACTGCACTCTGCCACACTCTGCAACAAGAGCAGCAATGCTGGTGAGGATCAACACACTGCTCCAAGGCTACTCAGGAATCAGATTTGAGATCCTTGAAGCCATTACAAAGCTGCTCAACACCAACATCACCCCATGTCTCCCCCTCAGAGGAACCATCACTGCCTCCGGCGACCTTGTCCCACTCTCCTACATTGCAGGCCTTCTAACTGGAAGGCCCAACTCCAAGGCTGTGGGCCCCAACGGAGAGAAACTCTCTGCAAAAGAAGCCTTCCAAGTGGCAGGAATCACCTCTGACTTCTTCGAGCTGCAGCCAAAGGAAGGGCTTGCCCTTGTTAATGGCACTGCTGTGGGTTCTGGCTTGGCCTCCATTGTGCTCTTTGAGGCCAACATTCTTGCTGTTCTGTCTGAAGTCATCTCTGCCATCTTCGCTGAGGTGATGCAGGGGAAGCCAGAGTTCACTGATCATCTGACTCACAAGCTGAAGCACCATCCTGGCCAGATTGAGGCTGCTGCAATCATGGAACACATTTTGGATGGAAGCTCTTACATGAAAGCAGCCAAGAAGCTGCATGAGATGGACCCTTTGCAGAAGCCAAAACAGGACCGCTATGCACTCAGGACTTCACCTCAATGGCTTGGTCCATTGGTTGAGGTTATAAGGTTCTCAACCAAGTCCATTGAGAGGGAGATCAACTCTGTCAATGACAACCCTTTGATTGATGTGTCCAGGAACAAGGCCTTGCATGGTGGTAACTTCCAAGGAACACCAATTGGTGTCTCCATGGATAACACTCGTTTGGCGCTTGCATCCATCGGTAAACTCATGTTTGCTCAGTTCTCTGAGCTTGTCAATGATTTCTACAACAATGGGTTGCCTTCAAACCTCTCTGGCAGCAGGAATCCAAGCTTGGATTATGGATTCAAGGGTGCTGAGATAGCCATGGCTTCTTATTGTTCTGAGCTGCAATACCTTGCCAATCCTGTCACAAGCCATGTGCAGAGTGCTGAGCAGCACAACCAGGATGTGAACTCTTTGGGTTTGATTTCTTCTAGGAAGACTAATGAGGCCATTGAGATCTTGAAGCTCATGTCTTCGACCTTCTTGGTCGCGCTTTGCCAGGCCATTGATCTGAGGCATTTGGAGGAGAATTTGAAGAACACTGTCAAGAACACTGTGAGCCTTGTTTCAAAGAGGACTCTCACCACAGGTGTCAATGGTGAACTCCACCCTTCCAGATTCTGTGAGAAGGACTTGCTTAAAGTGGTTGATAGGGAGCATGTTTTCGCCTATATCGATGATCCTTGCAGTGCTACATACCCATTGATGCAGAAGCTGAGGCAAGTTCTTGTTGACCATGCATTGGCAAATGCAGAGAATGAGAAGAACATGAGCACATCAATCTTCCAGAAGATTGCAACTTTTGAGGAGGAGCTGAAGACCCTCTTGCCAAAGGAGGTTGAAGGTGCAAGGCTTGCATATGAGAGTGGGAACACACCAATTCCAAACAAGATCAAGGAATGCAGATCATACCCACTTTACAAGTTTGTGAGAGAGGAATTGGGGACTGGTTTGCTCACTGGTGAAAAGGTGAGATCACCAGGTGAAGAGTTTGACAAGGTGTTCACAGCAATGTGCCAGGGTAGAATCATTGATCCTCTTCTGGAATGCCTTGGGGAGTGGAATGGTGCACCTCTTCCAATTTGTTAG 2190 0.5005 MESITMTNGHHNNHKSQNGTFCLPSKTATNGNVVGSSDPLNWGVAADSLKGSHLDEVKRMVAEYRKPVVKLGGETLTISQVAAIAAHDQGVRVVLSESARAGVKASSDWVMDSMNNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESNCTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNTNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGEKLSAKEAFQVAGITSDFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEVISAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPLVEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSGSRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLVALCQAIDLRHLEENLKNTVKNTVSLVSKRTLTTGVNGELHPSRFCEKDLLKVVDREHVFAYIDDPCSATYPLMQKLRQVLVDHALANAENEKNMSTSIFQKIATFEEELKTLLPKEVEGARLAYESGNTPIPNKIKECRSYPLYKFVREELGTGLLTGEKVRSPGEEFDKVFTAMCQGRIIDPLLECLGEWNGAPLPIC* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0262 729 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 28 729 - -
Aev06g0262 729 Gene3D Fumarase/aspartase (Central domain) 276 724 - -
Aev06g0262 729 MobiDBLite consensus disorder prediction 1 23 - -
Aev06g0262 729 Gene3D - 542 663 IPR023144 -
Aev06g0262 729 Gene3D - 29 275 IPR024083 -
Aev06g0262 729 PANTHER HISTIDINE AMMONIA-LYASE 28 729 IPR001106 -
Aev06g0262 729 SUPERFAMILY L-aspartase-like 38 729 IPR008948 GO:0003824
Aev06g0262 729 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 211 227 IPR022313 GO:0016841
Aev06g0262 729 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 38 718 IPR005922 GO:0005737|GO:0006559|GO:0016841
Aev06g0262 729 Pfam Aromatic amino acid lyase 76 551 IPR001106 -
Aev06g0262 729 CDD PAL-HAL 74 539 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0262 Aev-Chr6 1964142 1967578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0262 8 729 Monolignol Biosynthesis Gene Families AT2G37040 81.440 0.0 1247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0262 K10775 - gmx:100811101 1292.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0262 06 1964142 1967578 Aev09g1987 09 23225596 23229959 ECH
Aev06g0262 06 1964142 1967578 Aev06g0262 06 1964142 1967578 ECH