Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0257 ATGATAAGGTTCATGGAGACAAAGGAGAGACTGAAAGAGGTGGAAAAGAGTTTGGATTCTGAGCTATGGCACGCTTGTGCTGGAGGTATGGTTCAAATGCCAGAGGTGAATTCTAAGGTGTGCTACTTCCCCCAAGGCCATGCTGAGAGTGCATGTGGACCCTTTGACTTTGGGCCTTACCACAAGATTCCACCTTTCATTCAATGCAGAGTTGCTGCTATCAAGTTCATGGCTGATCCTGACTCTGATGAGGTCTATGCCAAACTCAGGCTTGTTCCTCTTACCAACAGTGGTGCTAATTCTGATGATGATGATGATGATGATGATGATGTTGGTGTTAGAGGCATCAATTGTTCTGAAACTCGTCAGAACAAACCACCTTCATTTGCTAAAACATTGACACAGTCTGATGCAAACAATGGGGGTGGCTTCTCTGTTCCAAGGTATTGTGCTGACACCATTTTCCCTCGGTTGGACTATTCGGCGGATCCTCCGGTTCAGGTCATCCTTGTCAAGGATGTTCTTGGCCAGACATGGAAATTCAGGCACATTTATAGGGGCACGCCGAAACGGCATCTCTTGACCACTGGTTGGAGTAACTTTGTCAATCACAAGAGGCTTGTTGCTGGGGACTCAGTTGTGTTCTTGAGAGCACAAAATGGGGATCTTTGCGTCGGAATTCGACGAGCAAAGAAGGGAGCAATTGGTGCTGGAACTGAGGCTTCTTCAGGATGGAACCCTGCTGGTGAGATTCATCATGTGTCCTATGGAGGTTTTGGGGCCCTTTTGGGAGAAGGTGATAGCCAATTCATGAGAAATGGAAATGGATTGAGCTCTAGTGATGGTGTGATGATGGGGAAGGGGAAAGTGAAGTCTGAAGAAGTAGCTGAAGCAGCAAATCTTGCTGCCAATTATAAGCCTTTTGAGGTTGTTTACTACCCTAGGGCTGGCACTCCTGAGTTTTGTGTTAAGGCCTCATTGGTTAGAGAAGCACTTCAGATTAGGTGGTGTCCTGGAATGAGGTTCAAGATGCCCTTTGAACATGAGGACTCATTGAGGGTAAGTTGGTCTTTGGGAACCATAACTTGTGTTCAGGTTGTTGACCCAACATGGCCTGGCTCTCCTTGGAGAATTCTCCAGGTGACATGGGATGAGCCAGAGTTGCATCAGAATGTGACAAGGGTGAGCCCTTGGCTTGTTGAGTTGGTACCAAACATTCCAGCACTCAATCTTTGTCCATTCTCACCACCTCGCAAGAAATTGAGATTGCCTCAACACCCAGATGATTTTCACCTTGATGGCCTAATTCATATGCCAACATTGCCAAGCAACCTTGTATATCCCAGCAACCTCTTTATCAATAGTTGTCTACATGAAATGACTCCTGCTGGCATGCAGGGAGCCAGGCATCCTCATTACGGTATATCCTTATCAGATATCCACCTCAACAAGCTGCAATCTGGTCTGGCTTCGACCGGTTTCGCCCCTTTCCATCGCGGCACCACCACATCAATGAAGCTCTCCAACGACCAAACATCGCAAAAGCCAAGCACAAGTGAGGATGTTTCTTGCTTATTATCCATGGCAAGCTCTTCACAGTCTTCAAAGAAACCGGATGATGCAAAGACATCACAGTCACAGTTTGTTCTGTTTGGCCAAAGAATTCTTACTGAACAGCAAATCTCCTCGAGCAGCTCTGCTGATACGGTATCGCCAGTTCTCAATGGAAATTGTTGTGCATTTGATGGAAATGCTTGTTCTGTTTCTGCTGCTTTTCATCAAAAAGATCACTTATCTTGTGAGTTTCCGGGGAGTTTGGAGACATCGGAGTGTAAAATTTATATGGATTCAGAAGGTGCCGGTTGGAGTATTGATCTATCATCGCTTGATTCTTATGATGAGCTGAATAGCAAGTTAGCGGACATTCTTAGCATACAAGGCTCAGAGATTCTGAGGCGTGTGGTTTATCACGATGTAAAGGGAGAGGTCAAACACATTGGAGATGAACAATTCTGTGAATTCGCCAGAACAACTAGGAAGTTGACTATTATGATGAATGATTCTGGCTGCGACAATGACAGTGGTGGAGGAATGTTGTTGAGGAAGAAAATAAACCTTAATTTGAATTTGAATTGTACAGGTGGTAGATGA 2151 0.4533 MIRFMETKERLKEVEKSLDSELWHACAGGMVQMPEVNSKVCYFPQGHAESACGPFDFGPYHKIPPFIQCRVAAIKFMADPDSDEVYAKLRLVPLTNSGANSDDDDDDDDDVGVRGINCSETRQNKPPSFAKTLTQSDANNGGGFSVPRYCADTIFPRLDYSADPPVQVILVKDVLGQTWKFRHIYRGTPKRHLLTTGWSNFVNHKRLVAGDSVVFLRAQNGDLCVGIRRAKKGAIGAGTEASSGWNPAGEIHHVSYGGFGALLGEGDSQFMRNGNGLSSSDGVMMGKGKVKSEEVAEAANLAANYKPFEVVYYPRAGTPEFCVKASLVREALQIRWCPGMRFKMPFEHEDSLRVSWSLGTITCVQVVDPTWPGSPWRILQVTWDEPELHQNVTRVSPWLVELVPNIPALNLCPFSPPRKKLRLPQHPDDFHLDGLIHMPTLPSNLVYPSNLFINSCLHEMTPAGMQGARHPHYGISLSDIHLNKLQSGLASTGFAPFHRGTTTSMKLSNDQTSQKPSTSEDVSCLLSMASSSQSSKKPDDAKTSQSQFVLFGQRILTEQQISSSSSADTVSPVLNGNCCAFDGNACSVSAAFHQKDHLSCEFPGSLETSECKIYMDSEGAGWSIDLSSLDSYDELNSKLADILSIQGSEILRRVVYHDVKGEVKHIGDEQFCEFARTTRKLTIMMNDSGCDNDSGGGMLLRKKINLNLNLNCTGGR* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0257 716 MobiDBLite consensus disorder prediction 117 136 - -
Aev06g0257 716 MobiDBLite consensus disorder prediction 97 136 - -
Aev06g0257 716 CDD B3_DNA 127 229 IPR003340 GO:0003677
Aev06g0257 716 Pfam Auxin response factor 298 380 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aev06g0257 716 SUPERFAMILY DNA-binding pseudobarrel domain 124 231 IPR015300 -
Aev06g0257 716 SMART B3_2 129 231 IPR003340 GO:0003677
Aev06g0257 716 ProSiteProfiles PB1 domain profile. 608 686 IPR000270 GO:0005515
Aev06g0257 716 Pfam B3 DNA binding domain 129 230 IPR003340 GO:0003677
Aev06g0257 716 Gene3D - 606 689 - -
Aev06g0257 716 Gene3D - 127 231 IPR015300 -
Aev06g0257 716 MobiDBLite consensus disorder prediction 501 520 - -
Aev06g0257 716 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 685 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aev06g0257 716 Gene3D - 335 406 - -
Aev06g0257 716 ProSiteProfiles B3 DNA-binding domain profile. 129 231 IPR003340 GO:0003677
Aev06g0257 716 PANTHER AUXIN RESPONSE FACTOR 6 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0257 Aev-Chr6 1896000 1898638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0257 14 684 B3 DNA Binding Superfamily AT4G30080 51.533 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aev06g0257 B3 2.7e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0257 - - fve:101313821 832.402