Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0253 ATGAAGATTCCTTGTTCTTTTTCCTCTTGTTTCTCATCATCAGGTTCGGTCAGAGAAGAAACCAATCAAGAAGAGGCAATTGGAGATAATGATGGAAGCTTTCGGGTGTTCACTTATAGGGAATTGGTATCAGCAACTCGTGATTTTCATCCCTCTGAGAAGGTTGGACAGGGGGGTTTTGGCTCTGTCTACAAGGGGCGGCTTCGGGATGGAAGTTTGGTGGCAGTGAAAGTTCTTTCCATTGAGCTTGAATCCATGCATGGAGAGAGGGAATTCGTGGCTGAATTGGCCACACTAGCAAATATCAAGCACCCTAATTTGGTCCTTCTTAGAGGCTGTTGTGTAGAAGGAGCCAATAGATACTTGGTCTATGATTACATGGAGAATAACAGTCTTCACCACACTTTCTTAGGTTCAGAGCAAAGTAGGATGAGATTCAATTGGGAAAGAAGGAGGGATGTGTGCATAGGTGTGGCACGTGTTCTTGCCTTTCTTCACGAGGAACTCAAGCCTCATATTGTGCACAGAGATATCAAAGCCACCAATATCCTTCTTGATGGAAATTTCACTCCAAAAGTCGCTGATTTTGGTTTGGCAAAGCTACTCAGAGATGAGAAGTCCTACATCAGTACCCGAGTTGCCGGGACATTGGGTTATCTTGCTCCAGAGTATGCGAGTTCTGGACAAGTGACGCGAAAATCAGATGTTTATAGCTTCGGAGTATTACTATTAGAAATTGTTAGTGGCAGAGCAGTGGTAGATGCTTTCCAAGAAAAGGATCGTTTCATTGTAGAGAAGGCTTGGGCAGCGTATGAATCGAATGAAATATTGAGAATGGTTGATCCAGTGGTGGGCGTGGATTATGCGGTTGAAGAAGTGAAACGGTTCCTGATGGTGGGGCTTTGTTGCGTGCAAGAAACAGCTAGGCTTAGGCCACGTATGCCTGAGGTGGTAGACATGTTGACTAACGGCAGCGTTGACTTGAACGGTGTTCACATTTCAAAACCGGGTTTTGTTGGAGATCTCAGGAATATCAGAATCAAGGAGAATCAGCCATTGCAGACACATTCATCAGAAGAATTGAGTTCTACTACTGGAGCAGGTGTTACTGCTAGTTCAATGTGGAGCTCCACCATTGTTGCTCGTTAA 1149 0.4465 MKIPCSFSSCFSSSGSVREETNQEEAIGDNDGSFRVFTYRELVSATRDFHPSEKVGQGGFGSVYKGRLRDGSLVAVKVLSIELESMHGEREFVAELATLANIKHPNLVLLRGCCVEGANRYLVYDYMENNSLHHTFLGSEQSRMRFNWERRRDVCIGVARVLAFLHEELKPHIVHRDIKATNILLDGNFTPKVADFGLAKLLRDEKSYISTRVAGTLGYLAPEYASSGQVTRKSDVYSFGVLLLEIVSGRAVVDAFQEKDRFIVEKAWAAYESNEILRMVDPVVGVDYAVEEVKRFLMVGLCCVQETARLRPRMPEVVDMLTNGSVDLNGVHISKPGFVGDLRNIRIKENQPLQTHSSEELSSTTGAGVTASSMWSSTIVAR* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0253 382 CDD STKc_IRAK 55 323 - -
Aev06g0253 382 SMART serkin_6 49 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g0253 382 Pfam Protein kinase domain 50 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g0253 382 Gene3D Transferase(Phosphotransferase) domain 1 127 329 - -
Aev06g0253 382 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 355 - -
Aev06g0253 382 ProSiteProfiles Protein kinase domain profile. 49 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g0253 382 Gene3D Phosphorylase Kinase; domain 1 10 126 - -
Aev06g0253 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Aev06g0253 382 ProSitePatterns Protein kinases ATP-binding region signature. 55 77 IPR017441 GO:0005524
Aev06g0253 382 PANTHER RECEPTOR-LIKE KINASE 7 355 - -
Aev06g0253 382 SUPERFAMILY Protein kinase-like (PK-like) 32 321 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0253 Aev-Chr6 1875403 1877132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0253 18 341 Receptor kinase-like Gene Family AT1G56120 48.308 3.65e-94 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aev06g0253 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0253 - - gmx:100813945 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0253 06 1875403 1877132 Aev06g0253 06 1875403 1877132 ECH
Aev06g0253 06 1875403 1877132 Aev02g2318 02 23995873 24002016 PCT