Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aev06g0252 | ATGGGCAACATGTCCAGCAGCGGTGGCGGCTCCGGCCGTCGCCGTAGCATCAGCTCAAGGCGGACCCATCCGCCGCCGCCACCACCCGTGACGCCGCAGCCGGAGATTACAGCGAACCCGTTCGTGTACCCGGGAGCCGCTCCACCGTACCCGCCACCGCATCAGTACCCCTCGAACTCGAACCCTCCGATGCATTACCCGCAGTACCATTACCCTGCATACTACCCTCCGCCGCCGCCGGTGCCCTTCCCCCACCACCCTCACAACCACCCTCCTCCTCACCACCCTCAAATGGACCACGGCTGGATGGCGGGCCGCGGGTATCCTTGCGGGCCCATGATGCCCCAGCCCGCGCCTTACGTGGAGCACCAGAAGGCCGTTACCATCAGGAACGATGTTAATATCAAGAAGGAGACGCTTAAGATAGAGCCCGATGCGGAAAACCCTGGGAGGTTCCTCGTGTCGTTCACGTTCGACGCCACCGTTTCTGGGTGCATCACCATATTATTCTTTGCAAAAGAAGTCGAAGGCTGCGTCCTCACACCAACGAAGGAAGACCTTCTCGCTCCTGTGACTGTTAATTTCCAGCAAGGTCTTAGCCAGAAGTTTAAACAACCTGCTGGAACTGGCATTGATTTTTCAATGTTCCAGGAGTCAGAGTTATTGAAACTGGGTGACATGGATGTCTACCCTCTAGCAGTGAAGGCAGAGTCGTCCTCTGCTAACCATGGCGTATCAGATGGAACTCAAACATCTGGTAACACAAACTCTCAGATAACCCAAGCGGTGTTTGAGAAAGAGAGAGGCGAATTCCAGGTGAAAGTTGTTAAGCAGATCTTGTGGGTAAATTTAGTTAGATATGAGCTGCAGGAGATATATGGTATCAGAAATTCAACAGAGACCGATGTGGATGAGAGTGACCAAGGAAAAGAATGCGTCATCTGTTTGTCCGAGCCTCGGGACACAATAGTCCATCCCTGCCGGCACATGTGCATGTGTAGCGAATGTGCAAAGGTTTTGAGGTTCCAGACAAACAGATGCCCAATTTGCAGACAGCCGGTTGAGAGGCTTTTGCAGATAAATGTAAGGCCTGAGGAGTGA | 1101 | 0.5377 | MGNMSSSGGGSGRRRSISSRRTHPPPPPPVTPQPEITANPFVYPGAAPPYPPPHQYPSNSNPPMHYPQYHYPAYYPPPPPVPFPHHPHNHPPPHHPQMDHGWMAGRGYPCGPMMPQPAPYVEHQKAVTIRNDVNIKKETLKIEPDAENPGRFLVSFTFDATVSGCITILFFAKEVEGCVLTPTKEDLLAPVTVNFQQGLSQKFKQPAGTGIDFSMFQESELLKLGDMDVYPLAVKAESSSANHGVSDGTQTSGNTNSQITQAVFEKERGEFQVKVVKQILWVNLVRYELQEIYGIRNSTETDVDESDQGKECVICLSEPRDTIVHPCRHMCMCSECAKVLRFQTNRCPICRQPVERLLQINVRPEE* | 367 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aev06g0252 | 366 | PANTHER | MAHOGUNIN | 1 | 365 | IPR045194 | GO:0061630 | |
| Aev06g0252 | 366 | MobiDBLite | consensus disorder prediction | 44 | 60 | - | - | |
| Aev06g0252 | 366 | MobiDBLite | consensus disorder prediction | 21 | 35 | - | - | |
| Aev06g0252 | 366 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Aev06g0252 | 366 | MobiDBLite | consensus disorder prediction | 1 | 63 | - | - | |
| Aev06g0252 | 366 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 294 | 362 | IPR013083 | - | |
| Aev06g0252 | 366 | CDD | mRING-HC-C3HC5_MGRN1_like---blasttree | 311 | 351 | IPR045195 | - | |
| Aev06g0252 | 366 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE | 1 | 365 | - | - | |
| Aev06g0252 | 366 | Pfam | Zinc finger, C3HC4 type (RING finger) | 310 | 356 | - | - | |
| Aev06g0252 | 366 | SUPERFAMILY | RING/U-box | 311 | 357 | - | - | |
| Aev06g0252 | 366 | ProSiteProfiles | Zinc finger RING-type profile. | 312 | 351 | IPR001841 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aev06g0252 | Aev-Chr6 | 1868855 | 1871278 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aev06g0252 | 108 | 331 | C3H Transcription Factor Family | AT3G09770 | 64.783 | 3.57e-100 | 298 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aev06g0252 | - | - | aprc:113862864 | 471.085 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aev06g0252 | 06 | 1868855 | 1871278 | Aev06g0252 | 06 | 1868855 | 1871278 | ECH | |
| Aev06g0252 | 06 | 1868855 | 1871278 | Aev02g2317 | 02 | 23992207 | 23994265 | PCT |