Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0250 ATGGAAAATGAAGCAGAAGGAGTTCCCAAGAACAAGGACAATGACCAAGTTGATACCCCAATTCAAAAGGGTATTGAATCAAGTGAAATAACTGAAGAACTCCCAAATACACAACATGGAAGAAGGCAAAACCTTATGTTGGAGATACCTACAAGAAATTTGGATGAAGCAAGAGAGGATTTTTTGAGAATAAACATGCCCCTAACTCCACCTCCTAGAACACCAATTTTTTCCCCATGTACAAGCCCTGGTTTCTCCAGCATCAATGAATTATATAGTCCATCGCTGACGAAAAACAAATCAACTATTAAGACCCTTATTCCCAAGCTCAGTTTTAAGATTCGCAACATGAATTTAGATACTGAAAAGGCTTCCATGCTAGCACTTGAAGGTTCTTCCACAGAGGCACTGAAAAAGCCTACAATTTCAAGGACATTGTCACTTACAAAGTTGATCACACCTAGAGGGAAGAAAATGGCATCCTTACCAGTAACCCCAATTGCTCAATCTAATGCAGAGTCCGGAGGGAATACAGCTAATCCAGCAACATCTGTGAAAGAAGGACAGAAATCGTCGATCCATCGTTCCCGTTCGGTTCCTGTGCTTACCAAAGATGGGATCCCATCAGTAGGTGCCATGTTCCGTGTAGTTCCTACCACACCACGGTTCGCTGGTAGCACTGCCACAACATCTATGAAATCTTCACCTGAGGATACTGTTGAAAATGAGGATGGGGAAGATATTCCTGAAGAGGAAGCTGTCTGCAGAATTTGTTTGATTGAACTGGGAGAAGGTGCTGATACACTTAAAATGGAGTGCAGCTGCAAAGGTGAACTTGCACTGGCGCACCAAGAATGTGCAGTTAAATGGTTTAGCATTAAAGGTAACAGAACTTGTGATGTGTGCAAGCAGGAAGTTAAGAACCTACCTGTCACTCTTTTACGAGTTCCAAGTGTCCATGCACCTACCTTCATGAGGAGCAGAGGTCAGCAGTACAGGGTTTGGCAAAATGTTCCCATTCTTGTGATTATCAACATGATGGCTTACTTTTGTTTTGTAGAACAGCTTCTTGTTTCAAGTATGGGGTCTGGTGCCATTGCCATATCTCTGCCATTTTCTTGTATACTAGGTCTTCTTGCAAGCATGACATCAACAACAATGGTGAGGAGAAAACATGTCTGGTTTTATGCAGTTCTACAGTTCATCATGGTGGTTCTCGCTGGACGTCTTTTCCATTCACTGCTTCATGTGCAAGCTGTTCTATCCATGCTACTTGCTACATTTACTGGGTTTGGAGCTGTAATGTGTGGAGCCTCGGTTCTTGTTGAGTTTTTAAAGTGGAGGAGGAGATGGCTTGCTCAGTTGAGTCAGCGTCAGCAGCATGGTTCCCAAGAGGTGGTGCCGCCGCTTGATCAATCATCTGCAGCCACTCATCCACCTCAGACTCTTTCTCAGCATCCAGAAAGTATCGAGGGAGACGCTACACAGCGCACGGAGTGA 1500 0.4393 MENEAEGVPKNKDNDQVDTPIQKGIESSEITEELPNTQHGRRQNLMLEIPTRNLDEAREDFLRINMPLTPPPRTPIFSPCTSPGFSSINELYSPSLTKNKSTIKTLIPKLSFKIRNMNLDTEKASMLALEGSSTEALKKPTISRTLSLTKLITPRGKKMASLPVTPIAQSNAESGGNTANPATSVKEGQKSSIHRSRSVPVLTKDGIPSVGAMFRVVPTTPRFAGSTATTSMKSSPEDTVENEDGEDIPEEEAVCRICLIELGEGADTLKMECSCKGELALAHQECAVKWFSIKGNRTCDVCKQEVKNLPVTLLRVPSVHAPTFMRSRGQQYRVWQNVPILVIINMMAYFCFVEQLLVSSMGSGAIAISLPFSCILGLLASMTSTTMVRRKHVWFYAVLQFIMVVLAGRLFHSLLHVQAVLSMLLATFTGFGAVMCGASVLVEFLKWRRRWLAQLSQRQQHGSQEVVPPLDQSSAATHPPQTLSQHPESIEGDATQRTE* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0250 499 MobiDBLite consensus disorder prediction 461 491 - -
Aev06g0250 499 ProSiteProfiles Zinc finger RING-CH-type profile. 247 309 IPR011016 GO:0008270
Aev06g0250 499 MobiDBLite consensus disorder prediction 225 246 - -
Aev06g0250 499 MobiDBLite consensus disorder prediction 20 41 - -
Aev06g0250 499 SUPERFAMILY RING/U-box 251 306 - -
Aev06g0250 499 MobiDBLite consensus disorder prediction 461 499 - -
Aev06g0250 499 Pfam RING-variant domain 255 302 IPR011016 GO:0008270
Aev06g0250 499 PANTHER OS02G0165000 PROTEIN 10 488 - -
Aev06g0250 499 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 240 311 IPR013083 -
Aev06g0250 499 MobiDBLite consensus disorder prediction 1 19 - -
Aev06g0250 499 MobiDBLite consensus disorder prediction 1 41 - -
Aev06g0250 499 SMART ringv_2 254 303 IPR011016 GO:0008270
Aev06g0250 499 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 10 488 - -
Aev06g0250 499 MobiDBLite consensus disorder prediction 168 198 - -
Aev06g0250 499 CDD RING_CH-C4HC3_MARCH 255 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0250 Aev-Chr6 1853677 1857559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0250 240 309 C3H Transcription Factor Family AT2G37950 38.028 1.70e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0250 - - gmx:100789854 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0250 06 1853677 1857559 Aev06g0250 06 1853677 1857559 ECH