Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0247 ATGTTTGAAGTTTCTGCTTTCACTGCTTGCCAGTTTCGATCCAAGAGGGCAAAGGGATTGCTTTACGCGCTCTTCATACTCAAATTTGTTCTAGTTTGCCAACTCATTCTCCTTCAACCTCTCGTTTCTGCTTCAGGTGGGAAATCTGGAGATGCTGCTGAGTTGTTTGAGAGAGTATCAGAAAGTATAAAAGTGAAACATTATACTGAGGCACTTAATGATCTAAATGCTGCCATAGAAGTAGATCCTAACCTTTCAAAGGCATATCTTTTCCGTGCATCAGTCCTTCGTCAGTTATGCAGATATGAGCAATCTGAGAGTAGCTACAAAAAGTATCTGGAGTTAAAACCTGGAGATTCAGCTGCGGAAAAGGAGCTATCTCAGCTGTTGCAGGCGAAGAGTGCCCTAGAAACAGCTCAGTCCCTCTTTGGTTTGGGCAACTTCACAAAATCTTTGGAATATATTGATAAAGTTGTTCTTGTGTTTTCTCCAGCTTGCACTGAGGCTAAGCTTCTCAAAGTGAAGCTGTTGATAGCTGATAAAGAGTATGAGGGTGCCATTGCTGAGTCTGGCTTTATGCTCAAAGAAGATGAAAATAACTTAGAGGCATTGCTGTTGCGTGGTCGTGCATATTACTATTTAGCTGATCATGATGTTGCAACCAGGCATTTCCAGAAAGGTCTCCGCCTAGATCCAGAGCACAGTGAACTTAAAAAAGCATATTTTGGTCTGAAAAATCTACTCAAAAAGAGTAAAAGTGCTGAAGATAATGCTAGTAAGGGTAAGCTCCGTGTGGCAGTGGAGGATTTTAAAAGCGCACTTGCAGTTGACCCTGACCATATTGCACACAATGTACATCTTCATCTTGGCTTATGTAAAGTCTTAGTCAAGCTTGGTAGAGGAAAAGATGCCTTGAACAGTTGCAGTGATGCTCTTAACATCAACGAGGAGCTTCTTGAAGCTCTTGTTCAGAGGGGAGAAGCTAAACTTTTAATAGAGGATTGGGAGGGAGCTGTTGCAGATCTGAAATCAGCTGCCCAAAAATCTCCTCAGGATATGAATATCCGTGAAGCATTAATGAGGGCTGAGAAAGCTCTAAAGCTGAGCAAACGCAAGGATTACTACAAGATTTTGGGAATTTCAAAAGTGGCTTCTGCAGCAGAGATAAAACGTGCATACAAGAAACTTGCTTTGCAATGGCACCCAGATAAGAATGTCGACAATAGGGAAGAAGCAGAGGCTCAATTCAGAGAAATTGCTGCTGCATATGAGGTTCTAAGCGATGAAGATAAACGCACGAGATATGATAGAGGGGAGGACCTTGAAGAATCCGGAATGGGTGGCGGCGGCGGCGGCGGTGGTTTCAATCCGTTTGGTGGTGGTGGGTTTGGTGGGCAGCAGTATACCTTCACCTTTGAAGGTGGCTTCCCTGGTGGTGGATTCGGAGGAGGCTTCCCCGGCGGATACGAATTCAATTTTTGA 1482 0.4372 MFEVSAFTACQFRSKRAKGLLYALFILKFVLVCQLILLQPLVSASGGKSGDAAELFERVSESIKVKHYTEALNDLNAAIEVDPNLSKAYLFRASVLRQLCRYEQSESSYKKYLELKPGDSAAEKELSQLLQAKSALETAQSLFGLGNFTKSLEYIDKVVLVFSPACTEAKLLKVKLLIADKEYEGAIAESGFMLKEDENNLEALLLRGRAYYYLADHDVATRHFQKGLRLDPEHSELKKAYFGLKNLLKKSKSAEDNASKGKLRVAVEDFKSALAVDPDHIAHNVHLHLGLCKVLVKLGRGKDALNSCSDALNINEELLEALVQRGEAKLLIEDWEGAVADLKSAAQKSPQDMNIREALMRAEKALKLSKRKDYYKILGISKVASAAEIKRAYKKLALQWHPDKNVDNREEAEAQFREIAAAYEVLSDEDKRTRYDRGEDLEESGMGGGGGGGGFNPFGGGGFGGQQYTFTFEGGFPGGGFGGGFPGGYEFNF* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0247 493 Pfam Tetratricopeptide repeat 66 120 - -
Aev06g0247 493 ProSiteProfiles TPR repeat profile. 86 119 IPR019734 GO:0005515
Aev06g0247 493 SMART tpr_5 132 165 IPR019734 GO:0005515
Aev06g0247 493 SMART tpr_5 86 119 IPR019734 GO:0005515
Aev06g0247 493 SMART tpr_5 285 318 IPR019734 GO:0005515
Aev06g0247 493 SMART tpr_5 319 352 IPR019734 GO:0005515
Aev06g0247 493 SMART tpr_5 52 85 IPR019734 GO:0005515
Aev06g0247 493 SMART tpr_5 201 234 IPR019734 GO:0005515
Aev06g0247 493 SUPERFAMILY Chaperone J-domain 367 473 IPR036869 -
Aev06g0247 493 Pfam Tetratricopeptide repeat 202 234 IPR013105 -
Aev06g0247 493 Gene3D Tetratricopeptide repeat domain 49 370 IPR011990 GO:0005515
Aev06g0247 493 CDD DnaJ 373 428 IPR001623 -
Aev06g0247 493 PANTHER DNAJ PROTEIN P58IPK HOMOLOG 11 493 IPR044620 -
Aev06g0247 493 SUPERFAMILY TPR-like 61 368 IPR011990 GO:0005515
Aev06g0247 493 ProSiteProfiles dnaJ domain profile. 373 439 IPR001623 -
Aev06g0247 493 Coils Coil 409 429 - -
Aev06g0247 493 ProSitePatterns Nt-dnaJ domain signature. 416 435 IPR018253 -
Aev06g0247 493 SMART dnaj_3 372 431 IPR001623 -
Aev06g0247 493 Gene3D DnaJ domain 371 484 IPR036869 -
Aev06g0247 493 PRINTS DnaJ domain signature 375 393 IPR001623 -
Aev06g0247 493 PRINTS DnaJ domain signature 393 408 IPR001623 -
Aev06g0247 493 PRINTS DnaJ domain signature 411 431 IPR001623 -
Aev06g0247 493 PRINTS DnaJ domain signature 431 450 IPR001623 -
Aev06g0247 493 ProSiteProfiles TPR repeat profile. 201 234 IPR019734 GO:0005515
Aev06g0247 493 Pfam DnaJ domain 373 436 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0247 Aev-Chr6 1838922 1843861 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0247 369 436 C2H2 Transcription Factor Family AT1G74250 48.611 9.32e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0247 K09523 - gmx:100804685 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0247 06 1838922 1843861 Aev06g0247 06 1838922 1843861 ECH