Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0245 ATGGACAAGGATCCTAGTCTAGAAATCCAACTCCCTCCAGGATTCAGATTCCACCCTTCAGATGAAGAGCTAATTGTTCACTATCTAAGAAACAAAGTGACTTCATCTCCACTTCCTGCATCATTCATAGCAGAGATAGACCTTTACAAGTATAATCCATGGGATCTCCCAAGTAAGGCTTTGTTTGGGGAAGATGAGTGGTATTTCTTTACTCCAAGGGATAGAAAGTATCCTAATGGAGTGAGGCCTAATAGAGCAGCAGGTTCTGGTTATTGGAAAGCTACAGGAACTGATAAACCAATAATTGCTTCATGTGGAAAGAAGAGCATTGGAGTGAAGAAGGCCCTTGTTTTCTACAAGGGTAGACCTCCAAAAGGGTCTAAAACTGATTGGATCATGCATGAGTATAGGTTGCAAGATTCACTTGTCTCAAAGTCCAAGCAAAGAGGGTCTATGAGATTGGATGAGTGGGTGCTATGCAGAGTTAGACAGAGAGCCAACACCACAAGAAACACTTGTGAAGATTCAAATAAACTTAGTTATGAACCAACAAAAAATAACTTTCAACAAATGAATGATCAGAACTTTGGTAGTCCTGAACCAGTTAAGAGCTCTGTGGACAATGGATTTCCATTGTTACCTTATATGCTTGCCTATAGGAGTACTTTGCCTAATTCAGTTGGGATGGCCTCAAGCACAGGCTTTTCTTGTGATGATGATATCAAAGCATATGGTTCAGTGCATGAAGACAGTTCCAATATAATAGGAGCACAGTTCTTAGCATCTGCAGTGGAGAGCTTGAAGAGAAAATCCATTGAAGAAAATCTGATGGAATATGCTCCTCACAATAAAAAACTAAGCCTAGGAGAATATGATTATGATAAGCAAGGACTTGTGATAGATCATGCAAGCAAAGGCTACAATTTCAGCTACTTTGATCAGTGGACTCATATCATACAACCTCAAGAGCTTAATAGCTTAGCCTTTATGGGATATACATGA 1002 0.3972 MDKDPSLEIQLPPGFRFHPSDEELIVHYLRNKVTSSPLPASFIAEIDLYKYNPWDLPSKALFGEDEWYFFTPRDRKYPNGVRPNRAAGSGYWKATGTDKPIIASCGKKSIGVKKALVFYKGRPPKGSKTDWIMHEYRLQDSLVSKSKQRGSMRLDEWVLCRVRQRANTTRNTCEDSNKLSYEPTKNNFQQMNDQNFGSPEPVKSSVDNGFPLLPYMLAYRSTLPNSVGMASSTGFSCDDDIKAYGSVHEDSSNIIGAQFLASAVESLKRKSIEENLMEYAPHNKKLSLGEYDYDKQGLVIDHASKGYNFSYFDQWTHIIQPQELNSLAFMGYT* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0245 333 SUPERFAMILY NAC domain 9 164 IPR036093 GO:0003677|GO:0006355
Aev06g0245 333 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
Aev06g0245 333 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Aev06g0245 333 Gene3D NAC domain 20 169 IPR036093 GO:0003677|GO:0006355
Aev06g0245 333 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 287 - -
Aev06g0245 333 PANTHER NAC TRANSCRIPTION FACTOR 56 2 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0245 Aev-Chr6 1819757 1821064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0245 11 170 NAC Transcription Factor Family AT1G69490 69.375 1.95e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev06g0245 NAM 1.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0245 - - gmx:100788799 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0245 06 1819757 1821064 Aev06g0245 06 1819757 1821064 ECH