Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0243 ATGATATTGCAAGTGGCAGTTATGGGGCATAGACATGTATATGGTGCACCTCCGATGTTTGAGGGTGAGCCTGACCCAAATTGGAGTCATGTCCATACTGATCAACATTATGTGCATCTTGGTAGGAGTAGCACTTCAGAGAATGGTTCCTTTATTTATCCTGTTGTGGAAAACATGTCTATAGATAGCATTTCTTTCCCCACTCATTGGAACTCTGCCACAAGGTCTAATGGTTATGCATCCTCAAGTCTCAATGTTGAAGTACCTCCTCATCAACCAGATGCATCAAACTCTTCTAATGATCATTTCACGCATTCAACAGCTGCTGGAGCTTTCTTTCCTGTGCCTGAAAATTATGCACACCACCCTTCTTCTTCCAATTATGACAGACAAGCTTTTCATGTTGATGGTGGTTTTATTGATCTTACAATGGGAAGTGCACGAGGGCCTCACAAAAGGAAGAGCCCTGGTATTCCTCCAGTCTGTGAGAGAGGCAGTTCAAGCAGATACTTCAATGCTGGGAGTTCAACGGATCTTTCTATGTCTTCAGAACTACGGCCAGAGAAGCCAAATATGGATTCTCAATATATGCCTTGGGATCATGTTACCATGGCACCCGCATTCAGAGGTGGTGGCCTTTCAATAAGGGGTGAGGGTTCTTTACGGAATGTGAGGAGTCGTTCTGCACTTGATTTGGAATCCAATCTGGCCAGGGCTCATTTACCACATAATCATCCACACAACTCCTACACTACTACCCCACCAGTTGACCATTCTAGCATGGTGGATCTTGCTGGTCCGACTTCTAACACTAACACTTTAACGAGGGATTGGAACCAAATAAACACATCTTCTCATGGAAGGGTGTTTTTATCAGATGCAAATGCTTTTAGTCTTGAAACAAGTCACTTCCTTGTTGGAAGTGGTGCTACTTCTAGTAATGCTTCTGTGGATGTAGGAGGTTTCCATCATGAATATGGTACAAGCCGAAATCCTATTGCTCCTCAAAATTTTCATAACAATCCTACTCAGACTGCTAGAGGAGCTCGAAGTAACTATTCTCAGAGATCCACTCCAGCATTTAGGGCTTCTTCAGGCTTGCGCTTGGGGCATGTGACTCCTTCAGATGATGGACTGCCTATGGTAGCTGAAAGTTATTCTTCTAGACATCCAAGGCCATTGACCACCATTGGCTGGCGGAATGGTGATAGAAATGGGAGATCAAGAATATCAAGTGATAGATATCGAGCATTGGCTGATGAGGGTTTCATGATTGTTGAGCGTGCACAACTCTATGGTTCTAGGAATATCCATGATCAGCACAGAGACATGAGGATGGACATTGACAACATGAGCTATGAGGAACTACTTGCACTTGGCGAGAGGATTGGCCATGTGAATACAGGATTATCTGAAGATTCGTTCTCCAAGTGTTTGACTGAAACTATATATTGCTCATCTGATCAAAGCCAAGATGAAGGAAATTGTGTTATCTGTCTCGAAGAGTACAAGGACATGGAGGATGTTGGGACTCTTAAAACTTGTGGACATGACTACCATGTAAGCTGCATTAAAAAGTGGTTATCTATGAAGAAACTGTGCCCTATCTGCAAAGCTTCTGCATTGCCTGAGGATGATACAAAGGATAAATAA 1653 0.4319 MILQVAVMGHRHVYGAPPMFEGEPDPNWSHVHTDQHYVHLGRSSTSENGSFIYPVVENMSIDSISFPTHWNSATRSNGYASSSLNVEVPPHQPDASNSSNDHFTHSTAAGAFFPVPENYAHHPSSSNYDRQAFHVDGGFIDLTMGSARGPHKRKSPGIPPVCERGSSSRYFNAGSSTDLSMSSELRPEKPNMDSQYMPWDHVTMAPAFRGGGLSIRGEGSLRNVRSRSALDLESNLARAHLPHNHPHNSYTTTPPVDHSSMVDLAGPTSNTNTLTRDWNQINTSSHGRVFLSDANAFSLETSHFLVGSGATSSNASVDVGGFHHEYGTSRNPIAPQNFHNNPTQTARGARSNYSQRSTPAFRASSGLRLGHVTPSDDGLPMVAESYSSRHPRPLTTIGWRNGDRNGRSRISSDRYRALADEGFMIVERAQLYGSRNIHDQHRDMRMDIDNMSYEELLALGERIGHVNTGLSEDSFSKCLTETIYCSSDQSQDEGNCVICLEEYKDMEDVGTLKTCGHDYHVSCIKKWLSMKKLCPICKASALPEDDTKDK* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0243 550 MobiDBLite consensus disorder prediction 330 355 - -
Aev06g0243 550 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 461 542 IPR013083 -
Aev06g0243 550 MobiDBLite consensus disorder prediction 245 276 - -
Aev06g0243 550 SUPERFAMILY RING/U-box 487 543 - -
Aev06g0243 550 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 8 544 IPR045191 GO:0061630
Aev06g0243 550 MobiDBLite consensus disorder prediction 240 276 - -
Aev06g0243 550 Pfam Ring finger domain 495 538 IPR001841 -
Aev06g0243 550 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 8 544 - -
Aev06g0243 550 MobiDBLite consensus disorder prediction 79 100 - -
Aev06g0243 550 MobiDBLite consensus disorder prediction 145 167 - -
Aev06g0243 550 SMART ring_2 496 537 IPR001841 -
Aev06g0243 550 ProSiteProfiles Zinc finger RING-type profile. 496 538 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0243 Aev-Chr6 1801375 1806012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0243 8 544 C3H Transcription Factor Family AT2G37150 42.238 1.21e-109 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0243 - - gmx:100803627 887.871