Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0240 ATGGCCGATGATGATTTCGATTTCACTGACAAAGTCCCTCCTTCCTTCGATCGCATGGATTCTGGATCCAGAGGGTTCAACCCAGGCTTGATAGTTCTCCTGGTCGTTTTTGGGTTGGTATTTGCCTTCCTCGTCGGAAATTTCGTGCTCTACACGTATGCACAGAAGAATCTCCCTCTGAAGAAGAAGAAGCCAGTGTCGAAGAAGAAGATGAAAAAGGAGAGACTGAAGCAAGGGGTTTCTGCACCTGGAGAGTAA 258 0.4729 MADDDFDFTDKVPPSFDRMDSGSRGFNPGLIVLLVVFGLVFAFLVGNFVLYTYAQKNLPLKKKKPVSKKKMKKERLKQGVSAPGE* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0240 85 MobiDBLite consensus disorder prediction 64 85 - -
Aev06g0240 85 Pfam DNA binding protein S1FA 22 85 IPR006779 GO:0003677|GO:0005634|GO:0006355
Aev06g0240 85 PANTHER DNA-BINDING PROTEIN S1FA2 4 85 IPR006779 GO:0003677|GO:0005634|GO:0006355
Aev06g0240 85 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 4 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0240 Aev-Chr6 1792269 1793487 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Aev06g0240 S1FA 4.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0240 - - adu:107493441 127.487