Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0228 ATGCACATAACTCGGGAAGAGGCGCCGCCGCGTCAGAAATTTGGATATGGAAGCTCCTCCTCCTCCTCCTCCTCCACCGTTCCATTCGGTTTACTGTATATATTTGACGTTTACTTCCCTCAGCAACTCTTCACTGTCCATGAATCCTGGCTCAACCTCACTTCCGCTCTTCTTTCCTTCTTCTCTTCTCCGGAGGGCAAAAACCTCACTTCTCAGGTAAAAAATGATTATGGAAACTTTGTCTTGTCAGTAGATTTTCAGCAGCTCAAACAAATATGTCACGTTGAGGAGTTTTATGAAATGTTAGAGGAGAATCCTAAAATTGCTCTCTTATGCATGAGTGCTGCAGTTCACAAGGTTTTGCTTTCCATATTGGAGAATGACAAGCTGGAGCTTGGTGCAAAAGTAGATATCCGTCTTCATAATTGTCCTGAAACTATGATTGCTCTGAAGAACTTAAAAGCAGCTTACATTGATAAGCTTGTCTCAGTTCGAGGTACTGCCGTGAAGGTCAGCACTGTCAGGCCTCTTGTGGTAGAAATGAGGTTTGAATGCAGTAAGTGTAAACAAACAATTACGCGTATATTTCCTGAGGGAAAATATTCACCTCCATCAATTTGCAATTTGAATGGTTGCAAGAGCAAAATCTTTAATCCATTGCGGTCTACTGCTCAAACCATTGATTTTCAGAAAATAAGAGTTCAAGAATTATTAAAACCTGAAGATCATGAAGAAGGACGGGTGCCTCGAACAGTGGAATGTGAGCTTACCCAAGACCTTGTTGATTCATGCATACCTGGAGATGTAGTGACTGTTACTGGAATTATAAAAGGAATTAACACTTACATGGATATTGGAGGAGGGAAGTCGAAGAACAGAAGCCAGGGATTTTATTATTTGTATCTGGAAGCTGTATCCGTAAAAAATTCTAAGTCACAATCCACACCTGATGATCTACAAGAATCTAATCCCAAAACTAGACCGACCGAGATTTTTGATCTGTTTTCGTTCTCTTCAAGGGATTTAGAATTTGTTGTGAAGTTTGCAGAGGAGCATGGTTCAGATTTATTTCGGCAAATCCTTCAATCTATATGCCCATCCATCTATGGGCATGAGCTTGTTAAAGCTGGGATAACTCTATCATTATTTGGAGGTGTACGAAAGCATTCTATGGATCCAAACAAGGTTCCCGTGAGGGGAGACATTCATGTCATAATTGTTGGTGATCCTGGTCTGGGTAAAAGCCAATTGCTACAAGCAGCAGCAGCTGTTTCTCCTCGCGGCATCTATGTCTGTGGGAATGCCACGACCAAAGCTGGCCTCACTGTAGCTGTAGTGAAGGATCCTATGACAAGTGACTACGCTTTTGAGGCTGGTGCTATGGTGCTGGCTGACAGTGGAATGTGCTGTATTGATGAGTTTGACAAAATGTCATCAGAACATCAGGCTTTACTGGAGGCAATGGAGCAACAGTGTGTATCTATTGCAAAGGCAGGGTTAGTTGCAAGTTTATCATCTCGGACTTCTGTCTTAGCAGCTGCAAACCCTGTTGGTGGTCATTACAACCGGGCAAAAACTGTAAATGAAAATTTGAAAATGAGTGCTGCTCTCCTCTCTCGTTTTGATTTAATTTTCATACTGCTGGATAAACCGGATGAACTTCTGGACAAACGACTCTCTGAGCATATTATGGCTCTCCATGCTGGGAGTGGACAACATTCACCGGCATTGAAAAAGCGACGTGAAGATCCGCCTTCTGATTCAAGAGCTGTTGTATCACATAATGCTGAGGGTGTCAGTTCTGGTTCTTTGGTTTCAAGGTTGAGACTTGACCCACAAAGAGACAGAGATTTTGTTCCACTACCCAGTCAACTTCTTCGTAAATACATTGCTTATGCAAGGAGTTATGTCTTTCCTAGGATGTCGAAGCCAGCAGCAGATATCCTACAAAAGTTTTACCTTAAACTGAGAGATCATAATACTTCAGCTGATGGCACTCCAATAACTGCAAGGCAACTAGAAAGTCTAGTTAGGCTTGCTGAAGCTCGAGCTCGCCTGGAGTTGAGAGTTGAAATAACGGCCCAGGATGCAATGGATGTTGTAGAAATCATGAAGGAATCATTGTATGATAAATATGTTGATGAGCATGGTTTTGTTGATTTTGGTCGAAGTGGTGGGATGAGTCAACAGAAAGAGGCAAAACGCTTTCTAAATGCCCTAAATAAGCAATCGGAACTGGAACAGAAAGATTGTTTTTCAGTAGCTGAAATATACAATCTGGCTGATAAGATTTCCTTGAAAGTTCCTGATATTGACACCTTCATCGATAACTTAAACAGCGTTGGTTATCTACTCAAAAAAGGACCAAAGACATACCAGGTGGTATCCTCCTCTTATACACGAAGCCAATCATTTAGGTCAAGGTCCTGA 2430 0.4189 MHITREEAPPRQKFGYGSSSSSSSSTVPFGLLYIFDVYFPQQLFTVHESWLNLTSALLSFFSSPEGKNLTSQVKNDYGNFVLSVDFQQLKQICHVEEFYEMLEENPKIALLCMSAAVHKVLLSILENDKLELGAKVDIRLHNCPETMIALKNLKAAYIDKLVSVRGTAVKVSTVRPLVVEMRFECSKCKQTITRIFPEGKYSPPSICNLNGCKSKIFNPLRSTAQTIDFQKIRVQELLKPEDHEEGRVPRTVECELTQDLVDSCIPGDVVTVTGIIKGINTYMDIGGGKSKNRSQGFYYLYLEAVSVKNSKSQSTPDDLQESNPKTRPTEIFDLFSFSSRDLEFVVKFAEEHGSDLFRQILQSICPSIYGHELVKAGITLSLFGGVRKHSMDPNKVPVRGDIHVIIVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTKAGLTVAVVKDPMTSDYAFEAGAMVLADSGMCCIDEFDKMSSEHQALLEAMEQQCVSIAKAGLVASLSSRTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLIFILLDKPDELLDKRLSEHIMALHAGSGQHSPALKKRREDPPSDSRAVVSHNAEGVSSGSLVSRLRLDPQRDRDFVPLPSQLLRKYIAYARSYVFPRMSKPAADILQKFYLKLRDHNTSADGTPITARQLESLVRLAEARARLELRVEITAQDAMDVVEIMKESLYDKYVDEHGFVDFGRSGGMSQQKEAKRFLNALNKQSELEQKDCFSVAEIYNLADKISLKVPDIDTFIDNLNSVGYLLKKGPKTYQVVSSSYTRSQSFRSRS* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0228 809 Pfam MCM OB domain 150 277 IPR033762 -
Aev06g0228 809 PRINTS Mini-chromosome maintenance (MCM) protein family signature 459 473 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aev06g0228 809 PRINTS Mini-chromosome maintenance (MCM) protein family signature 510 522 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aev06g0228 809 PRINTS Mini-chromosome maintenance (MCM) protein family signature 537 545 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aev06g0228 809 PRINTS Mini-chromosome maintenance (MCM) protein family signature 486 499 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aev06g0228 809 PRINTS Mini-chromosome maintenance (MCM) protein family signature 399 414 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aev06g0228 809 PANTHER DNA HELICASE MCM8 26 804 - -
Aev06g0228 809 Pfam MCM AAA-lid domain 625 708 IPR041562 -
Aev06g0228 809 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 26 804 IPR031327 GO:0003677|GO:0005524|GO:0032508
Aev06g0228 809 MobiDBLite consensus disorder prediction 1 23 - -
Aev06g0228 809 ProSiteProfiles MCM family domain profile. 356 563 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aev06g0228 809 SMART AAA_5 400 552 IPR003593 -
Aev06g0228 809 Pfam MCM P-loop domain 354 567 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aev06g0228 809 Gene3D - 334 717 IPR027417 -
Aev06g0228 809 CDD MCM8 360 707 - -
Aev06g0228 809 Gene3D - 150 279 IPR012340 -
Aev06g0228 809 Gene3D - 177 227 - -
Aev06g0228 809 SMART mcm 146 709 IPR031327 GO:0003677|GO:0005524|GO:0032508
Aev06g0228 809 SUPERFAMILY Nucleic acid-binding proteins 77 280 IPR012340 -
Aev06g0228 809 Coils Coil 471 491 - -
Aev06g0228 809 MobiDBLite consensus disorder prediction 570 598 - -
Aev06g0228 809 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 366 714 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0228 Aev-Chr6 1713354 1719615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0228 14 795 Core DNA Replication Machinery Family AT3G09660 70.775 0.0 1146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0228 K10737 - gmx:100784549 1326.61