Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0227 ATGGCCGATGGTCCGGCGAGTCCTGGCGGTGGTAGCCACGAGAGCGGCGAGCATAGCCCTCGCTCCAACATCAGGGAACAGGACAGGTTCCTCCCAATCGCTAACATCAGCCGCATCATGAAGAAAGCTCTTCCCGCCAACGGGAAAATCGCTAAGGATGCGAAGGAAACCGTTCAGGAATGCGTCTCCGAGTTCATCAGCTTCATCACTAGCGAGGCCTCTGATAAGTGTCAGAGAGAGAAGAGGAAGACCATCAACGGTGACGATTTGCTCTGGGCAATGGCAACTCTTGGCTTCGAGGATTATATTGATCCCTTGAAGATTTACCTCACCAGATACAGAGAGATGGAGGGCGATACCAAGGGTTCAGCCAAGGGTGGAGACGCATCTGCTAAGAAAGATGTTCAACCAAGTCCTAATGCTCAGCTTGCTCATCAAGGTTCTTTCTCACAAGGGTCAACATATGATGGTTCCTATGCAAGGTCCAGAGTAAGTATTGAGTCTATTGATTCTCCATCAGTGGTTATGATGTGTGTTTTCAGTGCTGTTGGAGCTTAA 558 0.4982 MADGPASPGGGSHESGEHSPRSNIREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGSAKGGDASAKKDVQPSPNAQLAHQGSFSQGSTYDGSYARSRVSIESIDSPSVVMMCVFSAVGA* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0227 185 MobiDBLite consensus disorder prediction 119 154 - -
Aev06g0227 185 MobiDBLite consensus disorder prediction 135 154 - -
Aev06g0227 185 Gene3D Histone, subunit A 17 152 IPR009072 GO:0046982
Aev06g0227 185 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED 1 156 - -
Aev06g0227 185 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
Aev06g0227 185 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 156 IPR027113 GO:0001228|GO:0006355|GO:0016602
Aev06g0227 185 SUPERFAMILY Histone-fold 27 129 IPR009072 GO:0046982
Aev06g0227 185 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Aev06g0227 185 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Aev06g0227 185 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Aev06g0227 185 MobiDBLite consensus disorder prediction 1 27 - -
Aev06g0227 185 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0227 Aev-Chr6 1708745 1711978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0227 7 149 CCAAT-HAP3 Transcription Factor Family AT2G37060 82.550 1.53e-84 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Aev06g0227 CBFD_NFYB_HMF 9.2e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0227 K08065 - gmx:100798667 286.189