Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0224 ATGTTGGATCTTAATCTCAACGTCGATTCCGTCTCCGGTTCAGTTGACATGGCTCCGGTCCCGCTCTCCGGCAGCCAAATGGAGAGTTCCGGTAGCTTCAATTCCTCTGTCGCCAATGCCGACACCGAAGACTCATGTTCTTACGGAGGCGATGCCGTTGCTTACAACTTCGCTATACTCAAGAACAGCACCGCCGAAGACGGCGCCGGAGATGACGGCGGTGTCCGGACCATCCAGCTTTTTCCGGTGACCGGAGCCGGTGACGGCGAGCGGTTACATGGCTCGTCGTCGTCTGGAAGCAAGGGATGGTTGGATTTTGCGTCGAAGGAGGTGGATCACGGTGGTGGTGTGGCGGCGGAGCAGAGGATCGTAGCTCAGAGGCCGCAGCAGGTGAAGAAGAGCCGCAGGGGACCGAGGTCAAGGAGCTCGCAGTATCGCGGCGTTACGTTCTACCGAAGAACCGGACGATGGGAATCGCATATATGGGACTGTGGGAAACAAGTGTACTTAGGTGGCTTTGACACAGCTCATGCTGCAGCTAGGGCATATGATCGAGCTGCAATTAAGTTTCGTGGAATTGATGCAGATATAAATTTCAATGTCAGCGATTATGATGAAGATATAAAGCAGATGAGTAACTTCACAAAGGAAGAATTTGTGCATATCTTGCGCCGTCAGAGCACCGGATTTTCGAGGGGAAGCTCCAAATACAGGGGAGTTACCCTGCATAAATGCGGCCGATGGGAAGCACGAATGGGGCAGTTTCTCGGCAAAAAGTACATCTATCTTGGGCTATTCGATAGTGAACTTGAAGCTGCAAGGGCATATGATAGGGCTGCTATAAAGTGCAATGGAAGGGAAGCAGTCACAAACTTTGAGCCCAGCTTATATGATGGGGAGGTAACTTCTCAGGCTGATAATGAAGATAGTAAGCAGGGTCTTGATCTTAACTTGGGCATAGCTCCCCCTTCTTTCTCCGATGGTCCAATCAATAACATGCACAACAATGGCGGCAGTTTGCAACTTCAGCGTAGCTGGGACGACAGCCCCATTGATCGGAGAGTTATGTTTGAGCACTCTGCATCAAGATCATTCTCCATGGCATCTGAGCATCCTTCTTCTGTCTGGAGTGGTACCAATTCCTTCCCCATCTATAAGGAGAGAGCAATAGAGAACATGATGGAAGCTGATCCCATGCCAAATTGGGCATGGCAAGTCCAAGGCCATTATGGCGGGGCAGCTCCGATTCCAGCGGTCTCTGCTGCAGCATCATCAGGATTCCCTTCAACATTGATTCCACCAGCTGCGGATAGTCAAATTCATTTTCCAAACATGACGTTCATCTACCCTCATTTCCCTCCATCAATCGCCAATTCTGGCACCATATCCCCTTTCTACTGCAGGAGCTGA 1410 0.5078 MLDLNLNVDSVSGSVDMAPVPLSGSQMESSGSFNSSVANADTEDSCSYGGDAVAYNFAILKNSTAEDGAGDDGGVRTIQLFPVTGAGDGERLHGSSSSGSKGWLDFASKEVDHGGGVAAEQRIVAQRPQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGIDADINFNVSDYDEDIKQMSNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSELEAARAYDRAAIKCNGREAVTNFEPSLYDGEVTSQADNEDSKQGLDLNLGIAPPSFSDGPINNMHNNGGSLQLQRSWDDSPIDRRVMFEHSASRSFSMASEHPSSVWSGTNSFPIYKERAIENMMEADPMPNWAWQVQGHYGGAAPIPAVSAAASSGFPSTLIPPAADSQIHFPNMTFIYPHFPPSIANSGTISPFYCRS* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0224 469 PRINTS Ethylene responsive element binding protein signature 237 248 IPR001471 GO:0003700|GO:0006355
Aev06g0224 469 PRINTS Ethylene responsive element binding protein signature 275 295 IPR001471 GO:0003700|GO:0006355
Aev06g0224 469 Pfam AP2 domain 144 192 IPR001471 GO:0003700|GO:0006355
Aev06g0224 469 Pfam AP2 domain 235 285 IPR001471 GO:0003700|GO:0006355
Aev06g0224 469 CDD AP2 235 295 IPR001471 GO:0003700|GO:0006355
Aev06g0224 469 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 461 - -
Aev06g0224 469 ProSiteProfiles AP2/ERF domain profile. 144 200 IPR001471 GO:0003700|GO:0006355
Aev06g0224 469 CDD AP2 144 202 IPR001471 GO:0003700|GO:0006355
Aev06g0224 469 ProSiteProfiles AP2/ERF domain profile. 236 293 IPR001471 GO:0003700|GO:0006355
Aev06g0224 469 SUPERFAMILY DNA-binding domain 235 294 IPR016177 GO:0003677
Aev06g0224 469 SUPERFAMILY DNA-binding domain 143 202 IPR016177 GO:0003677
Aev06g0224 469 SMART rav1_2 144 206 IPR001471 GO:0003700|GO:0006355
Aev06g0224 469 SMART rav1_2 236 299 IPR001471 GO:0003700|GO:0006355
Aev06g0224 469 MobiDBLite consensus disorder prediction 126 145 - -
Aev06g0224 469 Gene3D AP2/ERF domain 235 294 IPR036955 GO:0003700|GO:0006355
Aev06g0224 469 Gene3D AP2/ERF domain 143 202 IPR036955 GO:0003700|GO:0006355
Aev06g0224 469 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 1 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0224 Aev-Chr6 1677403 1679863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0224 66 319 AP2-EREBP Transcription Factor Family AT4G36920 64.179 8.19e-97 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Aev06g0224 AP2 1.1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0224 K09284 - gmx:100797238 649.047