Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0222 ATGGCGGCAGCAGCAGCAGCAGCTCGTCCCCTCGTCACTGTCCAAACTCTCGACGGTGACATGGCCACCGATGCCGCCCCAACCGTCCCCCTCCCCGATGTCATGAAAGCCTCTATCCGCCCTGACATCGTCACATTTGTCCACGACAACATCTCAAAGAACAAGCGCCAGCCCTACGCCGTCAGCCGTCGCGCCGGGCACCAGACCTCAGCCGAGTCCTGGGGAACTGGCCGCGCCGTCTCTCGTATCCCCCGTGTCCCCGGTGGTGGAACCCACCGTGCTGGCCAGGGAGCCTTCGGAAACATGTGTCGTGGAGGACGCATGTTCGCTCCCACCAAGATCTGGCGCCGCTGGCACAGAAAGATCAATGTCAACCAGAAGCGGTTCGCCGTTGTCTCCGCCATCGCCGCCTCCGCCATCCCCTCCCTTGTCCTCGCACGCGGTCACAGGATCGAGACCGTTCCTGAGTTTCCCCTCGTCGTCAGCGACACCGTCGAAGGCGTCGAGAAATCGAAGGAGGCCATTAAGGTTCTGAAGCAGGTGGGAGCTTTCCCCGACGCCGAGAAAGCCAAGGACAGCCACGGGATCCGCCCTGGGAAGGGTAAGATGAGGAACCGTCGCTACATTTCCCGGAAGGGACCACTGATCGTGTACGGAACCGAAGGAGCCAAAGCCGTTAAGGCCTTCAGGAACATTCCTGGTGTTGAGGTCGCTAACGTTGAGAGGCTCAACCTTCTGAAGCTCGCTCCTGGTGGGCACCTTGGAAGGTTCGTGATTTGGACCAAGAGTGCTTTCGAGAAGCTTGATTCGATCTATGGAACTTTTGATAAGGTTTCAGAGAAGAAGAAGGGCTACGTGCTTCCTAGGTCGAAGATGGTGAATGCTGATTTGGCTAGGATCATTAACTCTGATGAGGTTCAATCTGTTGTGAGGCCCATTAAGAAGGAGGTTAAGAGGGCTCCAATGAAGAAGAACCCATTGAAGAACCTGAATGTGATGTTGAAGTTGAATCCTTATGCTAAGACTGCTCGGAGAATGGCACTTCTTGCTGAGGCTGAGCGTGTTAAGGCCAAGAAGGAGAAGCTTGACAAGAAGCGCAGCACTGTTTCTAAGGAGGAAACTTCTGCCATCAAGGCTGCAGGAAAAGCTTGGTACCAAACCATGGTGTCGGACTCCGACTATGCTGAATTTGACAACTTCTCTAAGTGGTTGGGTGTTTCGCAGTAA 1227 0.5534 MAAAAAAARPLVTVQTLDGDMATDAAPTVPLPDVMKASIRPDIVTFVHDNISKNKRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRFAVVSAIAASAIPSLVLARGHRIETVPEFPLVVSDTVEGVEKSKEAIKVLKQVGAFPDAEKAKDSHGIRPGKGKMRNRRYISRKGPLIVYGTEGAKAVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKVSEKKKGYVLPRSKMVNADLARIINSDEVQSVVRPIKKEVKRAPMKKNPLKNLNVMLKLNPYAKTARRMALLAEAERVKAKKEKLDKKRSTVSKEETSAIKAAGKAWYQTMVSDSDYAEFDNFSKWLGVSQ* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0222 408 Pfam 60S ribosomal protein L4 C-terminal domain 283 355 IPR025755 -
Aev06g0222 408 PANTHER 60S RIBOSOMAL PROTEIN L4 4 408 IPR045240 -
Aev06g0222 408 ProSitePatterns Ribosomal protein L1e signature. 123 149 IPR013000 -
Aev06g0222 408 Pfam Ribosomal protein L4/L1 family 29 269 IPR002136 GO:0003735|GO:0005840|GO:0006412
Aev06g0222 408 Coils Coil 345 372 - -
Aev06g0222 408 MobiDBLite consensus disorder prediction 58 76 - -
Aev06g0222 408 MobiDBLite consensus disorder prediction 58 99 - -
Aev06g0222 408 Gene3D - 6 311 IPR023574 GO:0003735|GO:0005840|GO:0006412
Aev06g0222 408 PANTHER BNAC03G35890D PROTEIN 4 408 - -
Aev06g0222 408 SUPERFAMILY Ribosomal protein L4 12 270 IPR023574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0222 Aev-Chr6 1670894 1672652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0222 4 408 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 81.975 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0222 K02930 - gmx:100779764 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0222 06 1670894 1672652 Aev02g1038 02 9889447 9891712 PCT