Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0221 ATGAATGAACGAACGAGGAGGCAACCAGAGGAGTTAACACGTTGTGGTGTAGAAAGTTGGGTTTTGTGGTACTCGCCTAACAATTCTGCACCTCACATTCACATATACGGTATACCACCAGTCCACCACCCCGCCAATCCAATCCCCACATACTCTCTCTCTCTCTCTCTCTTTTCCTTTTCTCTCCCCTGTTTTTCCTCTGTTTTTTCTTTTTCCCTCCCCTGTTTTCCCTCTGTTCTGTTCTATCTATGTACTGTGTGCTTGAGGCATCATCTTCGCACCATGAATTCCAACTCCAACAACACTTCAAATCCTCCTCAGTCTCAGTCAATGGCGGCGCCCTCTGATTCCTCTGCTAACAAGAAGGTCAGAAAGCCTTACACCATCACCAAGTCCAGGGAGAGCTGGTCCGAGGAAGAGCACGACAAGTTCCTCGAAGCTCTTCAACTATTCGACAGAGATTGGAAGAAAATTGAGGATTTTGTAGGCTCAAAAACAGTTATTCAGATTCGAAGCCATGCCCAAAAATACTTTTTGAAAGTTCAAAAGAATGGGACAATGGCACATGTGCCTCCTCCTCGTCCTAAGCGCAAAGCCACACATCCTTACCCACAAAAAGCATCAAAAAATGTTTTGATGCCATTGCCAGCATCTATGGCTTATGCTTCTTCCACAAACACCATTGCACCTGGGTATGTCACATGGGATGAAAGTTCCATGCTCATCAATCCTGGATGCAACAAATCCATGTCCTGCCAGGATGAACTCACCAATCTTCATGGAAATGAAGCTGATATTAGATCGAAGGGGATGGCACGGATTAGCAGCAGCAGTCTTAGTGGTGTTGGGAGCTCTTCTAGAATGGTGCCGGTTACCGAGATGCAAAAGCATGGAACACAAACTCATGTGCTTCATGGTCTGCCTGACTTTGCTGAAGTTTATAGCTTCATCGGAAGCATTTTCGATCCTGAGACAAGAGGCCATGTTCAAAAGCTGAAGGAAATGGATCCTATTAATTTTGAAACCGTTTTACTGTTAATGAAAAACCTTACTGTCAATTTGTCTAGCCCTAACTTTGAACCTATTAAGGAGGCCATGTCATCCTATGATGTCAATACCAAGACAGCAGGAATGAATGTCAAGAAGCAAACAAACAACAATTTATCATGTCAACCTGTCTAA 1182 0.4408 MNERTRRQPEELTRCGVESWVLWYSPNNSAPHIHIYGIPPVHHPANPIPTYSLSLSLFSFSLPCFSSVFSFSLPCFPSVLFYLCTVCLRHHLRTMNSNSNNTSNPPQSQSMAAPSDSSANKKVRKPYTITKSRESWSEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTMAHVPPPRPKRKATHPYPQKASKNVLMPLPASMAYASSTNTIAPGYVTWDESSMLINPGCNKSMSCQDELTNLHGNEADIRSKGMARISSSSLSGVGSSSRMVPVTEMQKHGTQTHVLHGLPDFAEVYSFIGSIFDPETRGHVQKLKEMDPINFETVLLLMKNLTVNLSSPNFEPIKEAMSSYDVNTKTAGMNVKKQTNNNLSCQPV* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0221 393 MobiDBLite consensus disorder prediction 98 125 - -
Aev06g0221 393 SUPERFAMILY Homeodomain-like 127 183 IPR009057 -
Aev06g0221 393 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 182 IPR017930 -
Aev06g0221 393 SMART sant 132 180 IPR001005 -
Aev06g0221 393 CDD SANT 135 178 IPR001005 -
Aev06g0221 393 ProSiteProfiles Myb-like domain profile. 128 178 IPR001005 -
Aev06g0221 393 PANTHER SWI/SNF COMPLEX-RELATED 99 387 - -
Aev06g0221 393 PANTHER PROTEIN REVEILLE 8 99 387 - -
Aev06g0221 393 MobiDBLite consensus disorder prediction 98 126 - -
Aev06g0221 393 Pfam Myb-like DNA-binding domain 133 178 IPR001005 -
Aev06g0221 393 Gene3D - 136 183 - -
Aev06g0221 393 ProSiteProfiles SANT domain profile. 131 184 IPR017884 -
Aev06g0221 393 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 131 180 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0221 Aev-Chr6 1666193 1669556 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev06g0221 Myb_DNA-binding 1.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0221 - - gsj:114372630 452.981