Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev06g0187 | ATGAAGAGACGAATAGCGAACGAAGGAGTAGCCGCAGAAGGGTTATTAGATATTGCAGCTAATTGTTTGATTATGATGTCTCAGCAAGCACAAAGCATCAATCATCCTCCTCATAAAAACACAACCAATAATAATAATAATAACGAACAAGTGTTCAAGTGCAAGACGTGCAATCGCGAGTTCACTTCATTTCAAGCGCTTGGTGGCCACAGGGCAAGCTACAAGAGGCCGAAACTAATATATGATGATGATGATGATGGAGCAAAAGGAAAACAAGTGCCACGTGGCAGAGATGATTTGGGCTTGGGCCGGATGGAGAAGAAGCCCAAAATGCATGAGTGCTCAATCTGTGGTCAGAGATTCTGTCTGGGTCAGGCACTTGGAGGGCACATGAGAAAGCACAGAGATGGTGCTATCAGCGAATTAGGACTTGCTTCTGTAGATGTGAAGAACCACCAGGTGGTTGTTGATAAAGTTCCTGTACTCAAGAGATCCAGTAGTACTAGGGTCATGTGCTTGGACCTCAACTTAACGCCTCTTGAGAATGATTTGAAGTTATTGTTCGGCACTAAGGCACCCAAAGTTGATATTTCCTTCTGA | 600 | 0.44 | MKRRIANEGVAAEGLLDIAANCLIMMSQQAQSINHPPHKNTTNNNNNNEQVFKCKTCNREFTSFQALGGHRASYKRPKLIYDDDDDGAKGKQVPRGRDDLGLGRMEKKPKMHECSICGQRFCLGQALGGHMRKHRDGAISELGLASVDVKNHQVVVDKVPVLKRSSSTRVMCLDLNLTPLENDLKLLFGTKAPKVDISF* | 200 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev06g0187 | 199 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 114 | 134 | IPR013087 | - | |
Aev06g0187 | 199 | Pfam | C2H2-type zinc finger | 51 | 76 | - | - | |
Aev06g0187 | 199 | Pfam | C2H2-type zinc finger | 112 | 136 | - | - | |
Aev06g0187 | 199 | Gene3D | Classic Zinc Finger | 25 | 137 | - | - | |
Aev06g0187 | 199 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 112 | 134 | IPR013087 | - | |
Aev06g0187 | 199 | PANTHER | FINGER PROTEIN, PUTATIVE-RELATED | 15 | 197 | - | - | |
Aev06g0187 | 199 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 52 | 79 | IPR013087 | - | |
Aev06g0187 | 199 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 15 | 197 | - | - | |
Aev06g0187 | 199 | MobiDBLite | consensus disorder prediction | 80 | 103 | - | - | |
Aev06g0187 | 199 | SUPERFAMILY | beta-beta-alpha zinc fingers | 51 | 134 | IPR036236 | - | |
Aev06g0187 | 199 | SMART | c2h2final6 | 112 | 134 | IPR013087 | - | |
Aev06g0187 | 199 | SMART | c2h2final6 | 52 | 72 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev06g0187 | Aev-Chr6 | 1465553 | 1466152 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev06g0187 | 16 | 199 | C2H2 Transcription Factor Family | AT2G37430 | 43.548 | 5.69e-41 | 135 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Aev06g0187 | zf-C2H2_6 | 5.2e-08 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev06g0187 | - | - | qsu:112033021 | 174.866 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev09g2775 | 09 | 28284536 | 28285138 | Aev06g0187 | 06 | 1465553 | 1466152 | ECH | |
Aev06g0187 | 06 | 1465553 | 1466152 | Aev06g0187 | 06 | 1465553 | 1466152 | ECH | |
Aev06g0187 | 06 | 1465553 | 1466152 | Aev02g1152 | 02 | 11690471 | 11691028 | PCT |