Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev06g0186 | ATGGGCATGAAGAGACAGTCAAATCAAATAGAAGGGTTCGAGAACATAGATTTGGCAAATTGCCTCATGCTCCTGTCTCGTCCCCAAATAATGAGCAAAAACTACTCATCAACGCAAAGAAGTTATAGCCCCGCGGAATTCGAGTGCAAGACATGTAACCGCAAGTTCCCGTCATTTCAAGCACTGGGGGGACACAGAACAAGCCACAAGAGGACCAAAATTGAAGGCGAACAAGAGCTAAGGGCTCAAGCTAAATCGCTTAGCTTGGGGAACAAGCCAAAAATGCACGAGTGCTCCATTTGCGGCCAGGAATTCGCACTTGGACAGGCACTCGGAGGACACATGAGAAGGCACAGAGCAAATTTCAACGAAGATTATGTGTCTTCTGTAAAACGACAAGGAGAAGAAGAGGTTGTTGTTGCAAAAGTAGTTCCGGTTTTGAAGAGATCGAATAGCTTGAGGGCTAGGTGCTTGGATTTGAACTTGACACCGTTGGAGAATGATTTGAAGTTGTTGTTTGGAAACAGGACCCCCAAAATTGATGCCTTTGTCTGA | 555 | 0.4559 | MGMKRQSNQIEGFENIDLANCLMLLSRPQIMSKNYSSTQRSYSPAEFECKTCNRKFPSFQALGGHRTSHKRTKIEGEQELRAQAKSLSLGNKPKMHECSICGQEFALGQALGGHMRRHRANFNEDYVSSVKRQGEEEVVVAKVVPVLKRSNSLRARCLDLNLTPLENDLKLLFGNRTPKIDAFV* | 185 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev06g0186 | 184 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 49 | 69 | IPR013087 | - | |
Aev06g0186 | 184 | SUPERFAMILY | beta-beta-alpha zinc fingers | 47 | 118 | IPR036236 | - | |
Aev06g0186 | 184 | Pfam | C2H2-type zinc finger | 47 | 71 | - | - | |
Aev06g0186 | 184 | Pfam | C2H2-type zinc finger | 96 | 120 | - | - | |
Aev06g0186 | 184 | Gene3D | Classic Zinc Finger | 44 | 118 | - | - | |
Aev06g0186 | 184 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 47 | 74 | IPR013087 | - | |
Aev06g0186 | 184 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 3 | 179 | - | - | |
Aev06g0186 | 184 | SMART | c2h2final6 | 96 | 118 | IPR013087 | - | |
Aev06g0186 | 184 | SMART | c2h2final6 | 47 | 69 | IPR013087 | - | |
Aev06g0186 | 184 | PANTHER | C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN | 3 | 179 | - | - | |
Aev06g0186 | 184 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 98 | 118 | IPR013087 | - | |
Aev06g0186 | 184 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 96 | 118 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev06g0186 | Aev-Chr6 | 1461113 | 1461667 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev06g0186 | 3 | 181 | C2H2 Transcription Factor Family | AT2G37430 | 44.865 | 4.71e-44 | 142 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Aev06g0186 | zf-C2H2_6 | 2.1e-09 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev06g0186 | - | - | gmx:100527151 | 226.098 |