Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0186 ATGGGCATGAAGAGACAGTCAAATCAAATAGAAGGGTTCGAGAACATAGATTTGGCAAATTGCCTCATGCTCCTGTCTCGTCCCCAAATAATGAGCAAAAACTACTCATCAACGCAAAGAAGTTATAGCCCCGCGGAATTCGAGTGCAAGACATGTAACCGCAAGTTCCCGTCATTTCAAGCACTGGGGGGACACAGAACAAGCCACAAGAGGACCAAAATTGAAGGCGAACAAGAGCTAAGGGCTCAAGCTAAATCGCTTAGCTTGGGGAACAAGCCAAAAATGCACGAGTGCTCCATTTGCGGCCAGGAATTCGCACTTGGACAGGCACTCGGAGGACACATGAGAAGGCACAGAGCAAATTTCAACGAAGATTATGTGTCTTCTGTAAAACGACAAGGAGAAGAAGAGGTTGTTGTTGCAAAAGTAGTTCCGGTTTTGAAGAGATCGAATAGCTTGAGGGCTAGGTGCTTGGATTTGAACTTGACACCGTTGGAGAATGATTTGAAGTTGTTGTTTGGAAACAGGACCCCCAAAATTGATGCCTTTGTCTGA 555 0.4559 MGMKRQSNQIEGFENIDLANCLMLLSRPQIMSKNYSSTQRSYSPAEFECKTCNRKFPSFQALGGHRTSHKRTKIEGEQELRAQAKSLSLGNKPKMHECSICGQEFALGQALGGHMRRHRANFNEDYVSSVKRQGEEEVVVAKVVPVLKRSNSLRARCLDLNLTPLENDLKLLFGNRTPKIDAFV* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0186 184 ProSitePatterns Zinc finger C2H2 type domain signature. 49 69 IPR013087 -
Aev06g0186 184 SUPERFAMILY beta-beta-alpha zinc fingers 47 118 IPR036236 -
Aev06g0186 184 Pfam C2H2-type zinc finger 47 71 - -
Aev06g0186 184 Pfam C2H2-type zinc finger 96 120 - -
Aev06g0186 184 Gene3D Classic Zinc Finger 44 118 - -
Aev06g0186 184 ProSiteProfiles Zinc finger C2H2 type domain profile. 47 74 IPR013087 -
Aev06g0186 184 PANTHER ZINC FINGER PROTEIN ZAT5 3 179 - -
Aev06g0186 184 SMART c2h2final6 96 118 IPR013087 -
Aev06g0186 184 SMART c2h2final6 47 69 IPR013087 -
Aev06g0186 184 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 3 179 - -
Aev06g0186 184 ProSitePatterns Zinc finger C2H2 type domain signature. 98 118 IPR013087 -
Aev06g0186 184 ProSiteProfiles Zinc finger C2H2 type domain profile. 96 118 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0186 Aev-Chr6 1461113 1461667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0186 3 181 C2H2 Transcription Factor Family AT2G37430 44.865 4.71e-44 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev06g0186 zf-C2H2_6 2.1e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0186 - - gmx:100527151 226.098