Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0177 ATGACTTCGTTCCTGAAGCCTGAGAACGCCCTCAAAAGGGCTGAAGAATTGATCAACGTTGGGCAGAAGCAGGATGCTCTGCAAACTCTTCATGACCTGATTACCTCCAAAAGGTACAGGGCATGGCAGAAGACACTTGAACGAATCATGTTCAAGTATGTGGATCTCTGCGTCGATATGCGCAAGGGGCGGTTCGCCAAGGATGGGCTAATTCAGTATAGGATTATATGCCAGCAAGTGAATGTTAGCTCCCTTGAGGAGGTTATCAAGCATTTCATGCACCTATCGACCGAGAAAGCTGAGCAGGCCCGCAGCCAGGCACAGGCACTAGAAGAAGCCCTTGATGTTGATGATTTGGAGGCGGATAAAAGGCCGGAAGACTTGATGCTTAGCTACGTCAGTGGGGAGAAGGGGAAGGACAGATCTGACAGGGAGCTTGTTACCCCATGGTTTAAATTTCTATGGGAAACATACAGAACAGTGCTTGAAATATTGAGGAACAACTCGAAGCTGGAAACTTTGTATGCTATGACAGCTCATCGAGCTTTCCAGTTTTGTAAGCAATATAAGCGAACAACAGAGTTTCGCAGACTCTGTGAGATCATAAGAAATCACCTGGCCAATCTGAATAAATACCGTGATCAACGTGACAGGCCTGATCTTACTGCTCCTGACAGCTTGCAACTGTATCTGGATACAAGATTTGAGCAGCTGAAGATTGCCACCGAACTTGAACTGTGGCAGGAAGCTTTTCGCTCTGTTGAAGATATACATGGACTAATGTGCCTGGTCAAGAAGACACCCAAGTCATCCTTGATGGTTGTTTACTATGCTAAGCTGACAGAGATATTTTGGATTTCCTCAAGTCATCTATACCATGCCTATGCATGGTTCAGGCTATTTTTATTACAAAAAAGCTTCAATAAGAATTTGAGTCAGAAGGATTTGCAATTGATAGCTTCATCTGTTGTTCTTGCTGCACTTTCAGTTCCTCCTCATGATCGCACTCATGGTGCATCTCATTTGGAACTGGAACATGAAAAAGAGAGAAATTTGAGGATGGCTAATCTTATTGGCTTTAATCTTGAAACTAAAGCTGAGAGCAGAGAAGTGCTCTCAAGATCATCACTTCTAGCTGAACTGGTAACCAAGGGTGTGATGTCTTGTGTAACTCAGGAGGTGAAGGACATTTACCATATTCTGGAAAATGAATTCCTTCCCTCAGATCTTGCACTAAAAGTGCAGCCTTTGTTGACTAAAATATCAAAGTTAGGTGGTAAACTTTCCACTGCATCATCTGTCCCAGAGGTGCAATTGTCTCAGTATGTTCCTGCTCTGGAAAAATTAGCGACCTTGAGGTTGCTACAACAGGTCTCTAATGTGTACCAGACGATGAAGATCGAGACCTTATCCGGGATGATCCCCTTTTTTGATTTTTCTGTTGTGGAAAAGATTTCCGTTGATGCTGTTAAACAGAAGTTCGTATCAATGAAAGTTGACCACATGAGAAATGTTGTAATTTTTTGCAAAATGAGTCTTGAGTCTGATGGATTGAGGGATCACTTGGCAAACTTTGCTGAACGTTTGAATAAGGCAAGACAGATGATTTTTCCTCCAGAGAAGAAATCTTCAAAAATTGGAGCTCTGCTTCCCACTTTGTCAGAGGTTGTTGCCAAGGAACACAAGAGGCTTCTTGCTCGAAAATCCATTATTGAGAAGAGGAAAGAAGAACAAGAACGACAGCTTCTTGAAATGGAACGTGAGGAAGAGTCAAAGAGGTTGAGACTGCAGAAAATAACTGAAGAAGCAGAAAAAAGAAGGCTCGCCACTGAGTATGAGCAGAGAAAAAATCAGATGATCCGCAGGGAAATAGAGGAAAGAGAAAATGAAGAAACTGAAGCATTGCTTCTAGAAGCTGAGAAGGTTTTGAAGAAGGGTGGCAGAAAGCCAATCATTAAGGGGGATAAAATTACCAAGCAGACCTTGATGGCGCTGACTCTGACTGAACAACTCCGAGAAAGGCAAGAAATGGAGAAGAAACTGCAGAAATTAGCAAAAACCATGGATTATTTGGAAAGGGCAAAAAGGGAAGAGGCTGCTCCCCTGATTGAAGCTGCTTATAAAAAGCGCCAAGAGGAAGAAAAGATTCTTCATGAACTTGAGCAACAGCAAGAGATTGAATTGAGCAGACAGCGCCATGAAGGAGATCTGAAGGAGAAGGAGAGGCTTGCTCGAATGATCGACAATAAAGAGATATATCAAGAGAAAGTTGTGTCTCGTCGGCAAGCAGAATTCGACAGATTGAGGAAGGAAACGGAGGAGCGAATCTCTAGGATTTTACAGTCCAGGAGACAGGAGAGGGAAAGGATGAGGAAGTTGAAGTATTATCTCAAGGTAGAAGAAGAGAGGCAGCAAAAGTTGCGCGAGGAGGAGGAAGCTAGGAAACGAGAAGAGGCTGAGAGGCGTAAGAAGGAGGAGGCAGAACGCCTGGCAAAATTGGCTGAGATTGCTGAAAAACAGAGGCAAAGAGAGCGCGAACTCGAGGAGAAGGAAAGACAGAGGAGAGAAGCATTGTTGGGCAGAGCTAATGAGCCAGCTGCTAGGCCTTCTGAGCCTCCTGCCCGCCCAGTGGAATCTGGAACTGCTGCTGCTCCTGCAGCTGCTGCAGGACCTGCCCCAGGGAAATACGTCCCAAGGTTCCGGCGCGAGAAACCTGAAAGTGCTGCCGCACCACCACCTCCTGCAGAGACAGACCGTTGGAACAACAGCAGCAGCAAGCCCGATGGTGACAGGTGGCGTGATGAGCGCAGACCAGTATTTGGCTCTGGTGGTGGTCCTAGGTCAACATCCACCTGGTCATCCTCCAGGAACCGTTGA 2877 0.4532 MTSFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVDLCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLETLYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLTAPDSLQLYLDTRFEQLKIATELELWQEAFRSVEDIHGLMCLVKKTPKSSLMVVYYAKLTEIFWISSSHLYHAYAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDRTHGASHLELEHEKERNLRMANLIGFNLETKAESREVLSRSSLLAELVTKGVMSCVTQEVKDIYHILENEFLPSDLALKVQPLLTKISKLGGKLSTASSVPEVQLSQYVPALEKLATLRLLQQVSNVYQTMKIETLSGMIPFFDFSVVEKISVDAVKQKFVSMKVDHMRNVVIFCKMSLESDGLRDHLANFAERLNKARQMIFPPEKKSSKIGALLPTLSEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEKRRLATEYEQRKNQMIRREIEERENEETEALLLEAEKVLKKGGRKPIIKGDKITKQTLMALTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYKKRQEEEKILHELEQQQEIELSRQRHEGDLKEKERLARMIDNKEIYQEKVVSRRQAEFDRLRKETEERISRILQSRRQERERMRKLKYYLKVEEERQQKLREEEEARKREEAERRKKEEAERLAKLAEIAEKQRQRERELEEKERQRREALLGRANEPAARPSEPPARPVESGTAAAPAAAAGPAPGKYVPRFRREKPESAAAPPPPAETDRWNNSSSKPDGDRWRDERRPVFGSGGGPRSTSTWSSSRNR* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0177 958 Pfam PCI domain 373 508 IPR000717 -
Aev06g0177 958 Coils Coil 769 789 - -
Aev06g0177 958 MobiDBLite consensus disorder prediction 923 940 - -
Aev06g0177 958 MobiDBLite consensus disorder prediction 802 861 - -
Aev06g0177 958 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 - -
Aev06g0177 958 Coils Coil 620 642 - -
Aev06g0177 958 Coils Coil 796 856 - -
Aev06g0177 958 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 907 IPR027512 GO:0005852
Aev06g0177 958 Gene3D - 352 507 - -
Aev06g0177 958 Gene3D - 268 342 - -
Aev06g0177 958 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 907 - -
Aev06g0177 958 Coils Coil 667 697 - -
Aev06g0177 958 Coils Coil 703 723 - -
Aev06g0177 958 MobiDBLite consensus disorder prediction 802 958 - -
Aev06g0177 958 MobiDBLite consensus disorder prediction 944 958 - -
Aev06g0177 958 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 932 IPR027512 GO:0005852
Aev06g0177 958 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Aev06g0177 958 Coils Coil 561 602 - -
Aev06g0177 958 Coils Coil 93 120 - -
Aev06g0177 958 Gene3D UVR domain 217 267 - -
Aev06g0177 958 SMART PINT_4 441 532 IPR000717 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0177 1 958 Eukaryotic Initiation Factors Gene Family AT4G11420 72.471 0.0 1320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0177 K03254 - gmx:100782598 1431.77