Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0173 ATGGCGGCGGCACAGCGGCGGCTCCGGGAGCTGCAATCCCAAGCGGCGAACAAGATCTGTGTGGACTGCTCCCAGAAGAACCCGCAGTGGGCCTCCGTCTCCTACGGCGTCTTCATGTGTCTCGAGTGCTCCGGCAAGCACCGCGGCCTCGGCGTCCACATCTCCTTCGTCCGATCCGTCACCATGGACTCCTGGTCCGACATCCAGATCAAGAAGATGGAGGCCGGCGGCAACGACGCCCTCAATTCCTTCCTCTCCCAGTACGGTATCTCAAAGGAAACAGATATCGTCACCAAGTACAACACCAACGCCGCAAAAATTTACCGCGATCGCATCCAGGCCCTCGCCGAGGGACGCCCCTGGCGCGATCCACCCGTAGTCAAGGAGAATCTCCGCTCCTCCAAGGGGAAACCGCCGCTCTCTGCTCATAACGGTCACGGTAACGGTGACAGCGGAGGGTGGGATAGTTGGGATAATGACGACGGATTTGGTGGATCTCGTAACGATATTAGGAGGAATCAGTCTACGGGGGATGTGAGAGGGTTTGGTGGCAGCAGTGGTTCTGGCGGCGTTCCGGCGAGGTCGAAGTCGACGGAAGATATATACACGCGGTCGGAGCTGGAGGCCTCTGCGGCCAATAAGGAGAGCTTCTTCGCTCGGAAGATGGCGGAGAATGAATCAAAGCCCGAGGGGCTTCCACCTTCTCAGGGAGGGAAGTACGTCGGGTTTGGATCTAGCCCTGGCCCGGCGCCGAGTAACCCCCAAAACGACTATTTCTCCGTCGTTTCGCAGGGGATTGGTAAATTATCATTGGTTGCTGCATCTGCAGCTCAATCTGCTGCTAATGTTGTTCAGGCCGGCACGAAGGAGATATCTGCAAAGGTAAAAGATGGTGGTTACGATTACAAGGTCAATGAAACTGTCAATGTTGTCACTCAGAAGACATCTGAGATAGGACAGAGGACATGGGGCATAATGAAAGGGGTCATGGCACTGGCTTCACAGAAGGTCGAGGAGTTAACTAGGGATAACCCACCAAACTGGCAAAGAAATGAAAATGATAGAAACGGTTACTATCAAGAGCACAATCAGGGGAATCAAGGCTGGAATTCTTCTACCACAGCAGGACAGCCGTCATCAGGTGGACAGACCAATAACTCAAGTTCTTGGGACGATTGGGACCAGCAAGTTCCTAGGAAGCAAGAACCAGCTAAAGTATCAGCTCATCAGTCAGCAGGTGGACACTTTGGTACTTCCAACTCAAGCTCTTGGGATGATTGGGACCAGAAAGATACTAGGAAGGAAGAACCAGCAAAAGTATCAGCTCCTCATGGAAGTGATAGTTGGGCTGGCTGGGATGATGCCAAAGATGATGGATATGATCATTTCTATGGTACTGCATCTAACAATAAACCTGCTGGTCATAATGGGAAGCCAGATACAGCCTGGACAGGAGGAGGCTTTCTCTGA 1470 0.5306 MAAAQRRLRELQSQAANKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSDIQIKKMEAGGNDALNSFLSQYGISKETDIVTKYNTNAAKIYRDRIQALAEGRPWRDPPVVKENLRSSKGKPPLSAHNGHGNGDSGGWDSWDNDDGFGGSRNDIRRNQSTGDVRGFGGSSGSGGVPARSKSTEDIYTRSELEASAANKESFFARKMAENESKPEGLPPSQGGKYVGFGSSPGPAPSNPQNDYFSVVSQGIGKLSLVAASAAQSAANVVQAGTKEISAKVKDGGYDYKVNETVNVVTQKTSEIGQRTWGIMKGVMALASQKVEELTRDNPPNWQRNENDRNGYYQEHNQGNQGWNSSTTAGQPSSGGQTNNSSSWDDWDQQVPRKQEPAKVSAHQSAGGHFGTSNSSSWDDWDQKDTRKEEPAKVSAPHGSDSWAGWDDAKDDGYDHFYGTASNNKPAGHNGKPDTAWTGGGFL* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0173 489 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 410 489 IPR044519 GO:0005096|GO:0016192
Aev06g0173 489 SUPERFAMILY ArfGap/RecO-like zinc finger 5 114 IPR037278 -
Aev06g0173 489 MobiDBLite consensus disorder prediction 119 201 - -
Aev06g0173 489 ProSiteProfiles ARF GTPase-activating proteins domain profile. 5 121 IPR001164 GO:0005096
Aev06g0173 489 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 2 411 - -
Aev06g0173 489 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 410 489 - -
Aev06g0173 489 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 2 411 IPR044519 GO:0005096|GO:0016192
Aev06g0173 489 CDD ArfGap_ArfGap1 4 118 - -
Aev06g0173 489 Pfam Putative GTPase activating protein for Arf 6 102 IPR001164 GO:0005096
Aev06g0173 489 MobiDBLite consensus disorder prediction 223 254 - -
Aev06g0173 489 MobiDBLite consensus disorder prediction 426 441 - -
Aev06g0173 489 SMART arf_gap_3 5 121 IPR001164 GO:0005096
Aev06g0173 489 Gene3D Arf GTPase activating protein 1 130 IPR038508 -
Aev06g0173 489 MobiDBLite consensus disorder prediction 338 489 - -
Aev06g0173 489 PRINTS HIV Rev interacting protein signature 57 78 IPR001164 GO:0005096
Aev06g0173 489 PRINTS HIV Rev interacting protein signature 17 36 IPR001164 GO:0005096
Aev06g0173 489 PRINTS HIV Rev interacting protein signature 36 53 IPR001164 GO:0005096
Aev06g0173 489 MobiDBLite consensus disorder prediction 350 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0173 Aev-Chr6 1376701 1378990 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0173 5 88 C2H2 Transcription Factor Family AT4G21160 49.412 1.62e-22 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0173 K12492 - gmx:100778302 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0173 06 1376701 1378990 Aev06g0173 06 1376701 1378990 ECH