LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev06g0166	ATGAGAATCATCAATGAGCCTACTGCTGCTGCCATTGCTTATGGTCTTGACAAGAAGGCAACAAGCGTTGGTAAGAAGAATGTCTTAATTTTTGATCTTGGTGGCGGGACTTTTGATGTCTCTTTGCTTACTATTGAGGAGGGTATCTTTGAGGTGAAAGCCACAGCCGGAGACACCCATCTTGGGGGTGAGGATTTTGATAACAGAATGGTGAAGCACTTTGTCCAAGAGTTTAAGAGAAAGAACAAGAAAGACATTAGTGGCAACCCCAGAGCTCTTAGGAGGTTGAGGAATGCTTGTGAGAGGGCGAAGAGAACTCTTTCATCTACTGTCCAGACTATCATTGAAATTGATTCTCTTTATGAGGGTATTGATTTCTACTCACCCCTTAACCGTGCAAGATTTGAGGAGCTCAACATGGATCTCTTCAGGAAGTGTATGGAGCCAGTTGAGACATGTTTCAGAGATGCTAAGATGGACAAGAGAAGTGTACATGATGTTGTCCTTTTTGGTGGTTCCACTAGAATCCCCAAGGTTCAACAACTTTTGCAGAATTTCTTCAATGGGAAGGAGTTGTGCAAGAGCATTAACCCTGATGAGGCCGTTGCCTATGGTGCTACTGTTCAGGCTGCAATCTTGAGCGGTGAGGGCAAAGAAAAGGTTCAGGACCTCCTCCTCCTTGATGTCACTCCTCTCTCGCTTGGTTTGGAGACTGTTGGTGGTTTGATGGAAGTCCTTATCCCAAGGAACACTACGATTCCAACGATGAAGGAACAAGTTTTCTCAACATACTCTAACAACCAGCCTGGTATGTTGATCCAGGTCTTTGAAGGTGAGAGAACAAGGACAAGAGATAACAATTTGTTGGAAAAATTTGAACTCTCTGGCATTCCTCCAGCTCCCAAGGGTGTTCCACGAATCACTGTGTGCTTTGACATCGATGCCAACGGTATCTTGAATGTCTCTGCAACCACTGGCCAGAAGAATAAGATCACCATCACCAATGACAAGGGCAGACTATCAAAGGAAGATATTGAGAAGATGGTTCAAGAAGCCGAGAAGTACAAGTATGAGGATGAGGAGCATAAGAGGAAGGTTGAGGCCAAGATTGCATTGGAAAACTATGCATACAACATGAGGAACACTGTGAAGGATGACAACGTCGGTGGAAATTAG	1176	0.4439	MRIINEPTAAAIAYGLDKKATSVGKKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVKHFVQEFKRKNKKDISGNPRALRRLRNACERAKRTLSSTVQTIIEIDSLYEGIDFYSPLNRARFEELNMDLFRKCMEPVETCFRDAKMDKRSVHDVVLFGGSTRIPKVQQLLQNFFNGKELCKSINPDEAVAYGATVQAAILSGEGKEKVQDLLLLDVTPLSLGLETVGGLMEVLIPRNTTIPTMKEQVFSTYSNNQPGMLIQVFEGERTRTRDNNLLEKFELSGIPPAPKGVPRITVCFDIDANGILNVSATTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKYEDEEHKRKVEAKIALENYAYNMRNTVKDDNVGGN*	392

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev06g0166	391	Coils	Coil	93	113	-	-
	Aev06g0166	391	Pfam	Hsp70 protein	1	386	IPR013126	GO:0005524\|GO:0140662
	Aev06g0166	391	Gene3D	-	19	193	-	-
	Aev06g0166	391	ProSitePatterns	Heat shock hsp70 proteins family signature 3.	167	181	IPR018181	-
	Aev06g0166	391	Gene3D	Substrate Binding Domain Of DNAk; Chain A, domain 1	210	388	IPR029047	-
	Aev06g0166	391	Gene3D	-	1	209	-	-
	Aev06g0166	391	PANTHER	HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE	1	390	-	-
	Aev06g0166	391	Gene3D	Actin; Chain A, domain 4	62	145	-	-
	Aev06g0166	391	ProSitePatterns	Heat shock hsp70 proteins family signature 2.	30	43	IPR018181	-
	Aev06g0166	391	PANTHER	HEAT SHOCK PROTEIN 70KDA	1	390	IPR013126	GO:0005524\|GO:0140662
	Aev06g0166	391	SUPERFAMILY	Heat shock protein 70kD (HSP70), peptide-binding domain	219	373	IPR029047	-
	Aev06g0166	391	SUPERFAMILY	Actin-like ATPase domain	25	215	IPR043129	-
	Aev06g0166	391	PRINTS	70kDa heat shock protein signature	223	242	-	-
	Aev06g0166	391	PRINTS	70kDa heat shock protein signature	196	216	-	-
	Aev06g0166	391	PRINTS	70kDa heat shock protein signature	36	46	-	-
	Aev06g0166	391	PRINTS	70kDa heat shock protein signature	304	320	-	-
	Aev06g0166	391	PRINTS	70kDa heat shock protein signature	164	180	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev06g0166	Aev-Chr6	1328373	1329548	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev06g0166	1	389	Calmodulin-binding Proteins	AT3G12580	88.520	0.0	720

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev06g0166	K03283		-	gmx:100804917	702.205