Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0161 ATGAATCATCATCACTGTGTTCCAGATTTTGAAGTCCAGAATAATATGGATGATGAAGACTACCCTTACCCTTACCCTATACCCACGCCCTCTTCCGCCCCTCGCCAAAAGAAACCCTCCATGGGGGCAGACGAAGAGATCATGGAGCTGCTATGGCAAAACGGTCAGGTCGTGATGCAGAGTCAGAACCACCGTCCTCCTCTCAAGAAACCCCCGCCCCCGAGATTATCCGCCGATGAGATTGCCGCTGGTCCGTCCACGGCGAGGGAGGTTCGGCCGGAATTGCAGGGCTTCAACCAGCATCTGTTCATGCAAGAGGACGAGATGGCTTCGTGGCTTCACTATCCAATCGACGATCCTCCCTTGGATCAAACTTTCTGCGCCGATTTCCTCTACGCGCCGCAAACAGTTAACGGTAACCAAATCTGTAACAGCAGCAATAACAATGATAACGGTAACAGTGCCATGCAAACTCCAGTGCGTACTTCTCAGATGACGGAGCTCCGGCAGCCTCCGAGGACGGTGCCTCCCCGGCCTCCGATTCCGCCGGCGAGGAGGTCGGAGTCGGCAAAGACACCTAACTTTGCGTGCTTCGCGAAGCACAATGCCAGGGCGGCGGCGCCGGGGCCGTCATCGAGTTCTAAGGCAGCGGCGAGGGAGTTGACGGTTGTGGAGTCGTGCGACACGCCTTTTGCGGCAGCCGCGACTTCAGCAGAGCACACGGAAGGAGACGCCGGCCGCGGGAGCGTGAGCGGCGCCGGTGTGGCGGCGTCCGCCGGCGGAGGTAGGGGTACGACGACGTGCGATGTGACGATGACGTCATCTCCGGGAGGTTCGAGTAGCAGCGGGGAACCGGTTCAGAGGACGATGGCGGCGGAGGATCGGAAGCGGAAGGGAAGGGAATCGGAGGAATGGGAGTGTCAGAGCGAGGATGTTGATTTTGAATCGGCAGAAGCAAAAAAGCAAGCTCGTGGATCAACATCTACCAAGAGATCCCGTGCTGCAGAGGTCCATAATCTCTCAGAGAGGAGGCGACGTGATCGGATTAATGAAAAGATGAGAGCTCTGCAAGAACTAATACCTCGTTGTAATAAGTCTGACAAAGCTTCAATGCTGGATGAAGCAATTGAATACTTGAAGTCACTGCAGTTACAAGTGCAGATGATGTCCATGGGATGTGGCATGGTACCTATGATGTTTCCTGGTATCCAGCAGTACATGCCGGCAATGGGAATGGGGATCGGAATGGGAATGGGGATGGAAATGGGGATGAACAGACCGATGATGCCATTTCCGAATATGTTAGCAGGTTCGGCTTTGCCAGCAGCTGCAGCTGCTCATTTGGGACCAAGGTTCCCTATGCCTCCTTTCCACATGCCGCATCATGTTACTGCCCCTGATGCTTCTAGAATGCAAGCCGCAAATCAGTTAGATAATAATAATAATAATATGCTCACTTCAGTTGGTGCACCTGATCCAAATCCGTCACGTATCCCAAACTTCACTGATCCTTATCAACAATACCCTGGTCCCCACCCAATGCAATTTCAATTAATGCAGAATCAGGTAATGAACCAACAAAATGTTAGCAGCAAGCCAAGTAGCAGTAGGCCCCCTGAGAATCCCGAAAATCAGCAGCCAGGAGAAAAATGA 1653 0.5324 MNHHHCVPDFEVQNNMDDEDYPYPYPIPTPSSAPRQKKPSMGADEEIMELLWQNGQVVMQSQNHRPPLKKPPPPRLSADEIAAGPSTAREVRPELQGFNQHLFMQEDEMASWLHYPIDDPPLDQTFCADFLYAPQTVNGNQICNSSNNNDNGNSAMQTPVRTSQMTELRQPPRTVPPRPPIPPARRSESAKTPNFACFAKHNARAAAPGPSSSSKAAARELTVVESCDTPFAAAATSAEHTEGDAGRGSVSGAGVAASAGGGRGTTTCDVTMTSSPGGSSSSGEPVQRTMAAEDRKRKGRESEEWECQSEDVDFESAEAKKQARGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGIQQYMPAMGMGIGMGMGMEMGMNRPMMPFPNMLAGSALPAAAAAHLGPRFPMPPFHMPHHVTAPDASRMQAANQLDNNNNNMLTSVGAPDPNPSRIPNFTDPYQQYPGPHPMQFQLMQNQVMNQQNVSSKPSSSRPPENPENQQPGEK* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0161 550 MobiDBLite consensus disorder prediction 235 341 - -
Aev06g0161 550 MobiDBLite consensus disorder prediction 264 287 - -
Aev06g0161 550 MobiDBLite consensus disorder prediction 1 42 - -
Aev06g0161 550 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 4 548 IPR031066 -
Aev06g0161 550 MobiDBLite consensus disorder prediction 289 305 - -
Aev06g0161 550 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 333 382 IPR011598 GO:0046983
Aev06g0161 550 MobiDBLite consensus disorder prediction 172 186 - -
Aev06g0161 550 CDD bHLH_AtPIF_like 333 396 - -
Aev06g0161 550 MobiDBLite consensus disorder prediction 143 191 - -
Aev06g0161 550 SMART finulus 339 388 IPR011598 GO:0046983
Aev06g0161 550 Pfam Helix-loop-helix DNA-binding domain 337 383 IPR011598 GO:0046983
Aev06g0161 550 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 331 399 IPR036638 GO:0046983
Aev06g0161 550 MobiDBLite consensus disorder prediction 143 170 - -
Aev06g0161 550 Gene3D - 328 391 IPR036638 GO:0046983
Aev06g0161 550 MobiDBLite consensus disorder prediction 513 550 - -
Aev06g0161 550 MobiDBLite consensus disorder prediction 484 550 - -
Aev06g0161 550 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 4 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0161 Aev-Chr6 1304234 1308219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0161 4 388 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G20180 43.000 7.51e-73 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev06g0161 HLH 2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0161 - - gmx:100797225 572.392