Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0139 ATGGAAGCACAAAGAATTGGAGAGAAATTAGGCAGAAAGGCATCAAAACACACAGCACTACAATTGACAGCACTTGTTGTAGATGATGATAGACAAGTCAGAATGATTCACCAAAGGATGTTGAACAAAGCTGGAGTGAAGAATCAGGCACTGGAAAATGGCAAACAAGCACTGGACATTCATGGAACTGGTCTAAGGTTTGACTTGATTCTCATGGACAAGGAAATGCCTGTCATGTGTGGCATTGAGGCAACAAAGAAACTTCGATCAATGGGGGTTGGAAGCATGATTGTTGGTGTATCATCAAGCACTGGTGAAGCAGAGATAAGAGAATTTGTGGAAGCAGGGTTAGATGACTTCATAGTGAAACCCTTAAGCATTGATATGCTTAATTCAATTCTTGACAAGATCAAGTGA 417 0.4077 MEAQRIGEKLGRKASKHTALQLTALVVDDDRQVRMIHQRMLNKAGVKNQALENGKQALDIHGTGLRFDLILMDKEMPVMCGIEATKKLRSMGVGSMIVGVSSSTGEAEIREFVEAGLDDFIVKPLSIDMLNSILDKIK* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0139 138 SMART REC_2 22 134 IPR001789 GO:0000160
Aev06g0139 138 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 11 137 - -
Aev06g0139 138 CDD REC_hyHK_CKI1_RcsC-like 25 134 - -
Aev06g0139 138 Gene3D - 8 138 - -
Aev06g0139 138 SUPERFAMILY CheY-like 22 137 IPR011006 -
Aev06g0139 138 ProSiteProfiles Response regulatory domain profile. 23 138 IPR001789 GO:0000160
Aev06g0139 138 Pfam Response regulator receiver domain 25 133 IPR001789 GO:0000160
Aev06g0139 138 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0139 Aev-Chr6 1104169 1105142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0139 22 126 Response Regulator Gene Family AT3G04280 46.729 1.42e-23 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev06g0139 Response_reg 1e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0139 - - aprc:113860782 149.828