Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0122 ATGGATATTACAGCCCATGACCAGGCCCATAACACTTCAAGATCGCTAAACCCTAGTCTGCGTCCGAGAGCGATATATAAAGAACAGAAAGTGGGCAAAACTAGGGTTTGTGCTGTGGTGATCTCGAGAGTAGCAACAATGTCGAAGAGAGGTCGCGGTGGTACGGCTGGGAACAAGTTCAGGATGTCACTGGGTCTTCCGGTGGCGGCGACGGTGAACTGCGCCGACAATACCGGAGCCAAGAACCTCTACATCATCTCCGTGAAGGGGATCAAGGGAAGGCTGAACCGGTTGCCTTCAGCTTGCGTCGGTGATATGGTGATGGCTACTGTCAAGAAGGGTAAGCCCGATCTCAGGAAGAAGGTGTTGCCAGCTGTCATCGTCCGCCAGAGGAAGCCATGGCGCCGAAAGGACGGTGTTTACATGTACTTTGAAGATAATGCCGGGGTCATTGTGAATCCCAAGGGTGAAATGAAAGGATCTGCCATCACTGGTCCAATTGGAAAGGAGTGTGCTGATCTGTGGCCTAGGATTGCAAGTGCAGCCAACGCCATTGTTTGA 561 0.5205 MDITAHDQAHNTSRSLNPSLRPRAIYKEQKVGKTRVCAVVISRVATMSKRGRGGTAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0122 186 MobiDBLite consensus disorder prediction 1 19 - -
Aev06g0122 186 Pfam Ribosomal protein L14p/L23e 68 186 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aev06g0122 186 MobiDBLite consensus disorder prediction 1 21 - -
Aev06g0122 186 ProSitePatterns Ribosomal protein L14 signature. 125 151 IPR019972 -
Aev06g0122 186 SMART Ribosomal_L14_2 65 186 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aev06g0122 186 Gene3D Ribosomal protein L14 47 186 IPR036853 GO:0003735|GO:0005840|GO:0006412
Aev06g0122 186 PANTHER 60S RIBOSOMAL PROTEIN L23 47 186 - -
Aev06g0122 186 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 47 186 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aev06g0122 186 SUPERFAMILY Ribosomal protein L14 57 186 IPR036853 GO:0003735|GO:0005840|GO:0006412
Aev06g0122 186 Hamap 50S ribosomal protein L14 [rplN]. 65 186 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0122 Aev-Chr6 972760 974181 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0122 47 186 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 98.571 9.03e-100 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0122 K02894 - twl:120003611 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0122 06 972760 974181 Aev02g0837 02 7277292 7279144 PCT