Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0102 ATGGACCATGTCATTGGTGGGAAGTTTAAACTTGGGAGGAAAATTGGGAGTGGGTCTTTTGGGGAGCTTTATATAGCTGTTAATGTACACACTGGAGAAGAGGTGGCTGTGAAGCTGGAATCTGTGAAGACAAAGCATCCACAGCTTCATTATGAGTCAAAATTGTATATGCTTCTTCAGGGAGGAACGGGCATTCCCCATATTAAGTGGTTTGGAGTTGAAGGAGACTACAATATCATGGCTATTGATCTTCTTGGACCAAGTCTGGAAGATTTGTTCAATTATTGCAACCGGAAGTTTACACTGAAGACAGTGCTAATGCTTGCCGACCAATTACTTAACAGAGTTGAGTATATGCATTCAAAAGGTTTCCTTCACCGTGACATAAAGCCAGACAATTTTCTTATGGGCCTAGGACGTAAAGCAAACCAGGTGTACATCATTGACTATGGCCTTGCAAAAAAATATAGGGACCTCCAGACTCATAGGCACATACCATACAGGGAAAACAAGAACCTTACAGGCACAGCTCGATATGCAAGTGTCAACACTCATCTCGGAATTGAACAAAGCAGAAGGGATGACCTGGAATCTCTTGGTTATGTGCTCATGTACTTCCTAAGGGGAAGTCTTCCTTGGCAAGGTCTGAAAGCTGGCACCAAAAAACAGAAATACGATAAAATCAGTGAGAAGAAGATATCAACTTCCATAGAGTCACTCTGCAAAAATTATCCCTCAGAGTTTGTATCATATTTCCACTACTGCCGATCGTTTAGGTTTGAGGACAAGCCAGATTATTCATATTTAAGGAGGCTGTTCCGAGATTTATTTATTAGAGAAGGCTATCAGTTTGACTATGTTTTTGACTGGACTATATTGAAGTATCCACAAATCAGTGGCAGCAGCTCTAGAGGGAGGCATAGCAGTGGCAAGGCAGCTATGCATGCTGGACCATCTGTTCAAAAGCCAGAGAAGATCTCAGGTTCAGCTGCGAAAGAGACTCGAGAGAGATACTCTGGTGCTGTTGAAGGTTTCTCCCGGAGGAACCCTACTGGTTCTAGTCCTCATCATGATCACACCAAACATAGGACTTTTGAAGATGCAGCAATACAAAGGGATGCGCATCATGATCAAGAGAAGGGACGCAGTTCCTCTCGATATGGCAGCAGTTCAAGAAAGGCCTTAATTTCATCATCTACCAGGCCAAGTTCCTCAGCTGACCACACTGACAGTCGTACCGGCCGGATGACCTCAAGCAGTAGCCGTCCATCTACTGCACAGAGAGTTCAACCTATGTATGAGACCAAACAACCATCTTTCACGCGTACTGGATCTGCAAGAGCCAATCGCGAAGACCCTCTGCGGAGCTTTGAGCTCCTCTCTATCAGGAAGTAA 1395 0.4423 MDHVIGGKFKLGRKIGSGSFGELYIAVNVHTGEEVAVKLESVKTKHPQLHYESKLYMLLQGGTGIPHIKWFGVEGDYNIMAIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLLNRVEYMHSKGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKISTSIESLCKNYPSEFVSYFHYCRSFRFEDKPDYSYLRRLFRDLFIREGYQFDYVFDWTILKYPQISGSSSRGRHSSGKAAMHAGPSVQKPEKISGSAAKETRERYSGAVEGFSRRNPTGSSPHHDHTKHRTFEDAAIQRDAHHDQEKGRSSSRYGSSSRKALISSSTRPSSSADHTDSRTGRMTSSSSRPSTAQRVQPMYETKQPSFTRTGSARANREDPLRSFELLSIRK* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0102 464 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g0102 464 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 452 - -
Aev06g0102 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Aev06g0102 464 MobiDBLite consensus disorder prediction 384 446 - -
Aev06g0102 464 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Aev06g0102 464 MobiDBLite consensus disorder prediction 301 464 - -
Aev06g0102 464 Gene3D Transferase(Phosphotransferase) domain 1 1 340 - -
Aev06g0102 464 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Aev06g0102 464 MobiDBLite consensus disorder prediction 328 342 - -
Aev06g0102 464 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g0102 464 MobiDBLite consensus disorder prediction 448 464 - -
Aev06g0102 464 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g0102 464 CDD STKc_CK1_delta_epsilon 8 282 - -
Aev06g0102 464 PANTHER CASEIN KINASE-RELATED 1 452 - -
Aev06g0102 464 MobiDBLite consensus disorder prediction 352 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0102 Aev-Chr6 853939 858716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0102 8 213 MAP Kinase Kinase Kinase AT3G06030 26.852 1.42e-13 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Aev06g0102 Pkinase 4.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0102 K08960 - gmx:100781494 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0102 06 853939 858716 Aev02g0821 02 7097143 7102227 PCT