Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0098 ATGCCTATGAAGATTTATGCTAAGATGATGGAATCTGGAAGTGATGTTTCCATACTTAAAAAGATGGGAGATCTTTCAGTTCCCCCTGGTTTTGCATCGCTAACATCTTTCGTTTTGAAAAAGGGTGTAAAGGTTAAGGAAGTTGGTAAATCTGCAACTTTTCTTAATGAGTATGAGAATGAGCCGGTCTATATGGACTCTGACTGTCGGATGAATGATATTAATGCATATAACAAGAGACCATGGATACTCGTGGACCAAAGCGACAACAAACTTGACGAATCTCACACCGAGCATCTTCCTATGGATCGCCCTTCAAATGCTTGTCGTCCAAAAGGGACCATTGGTGGATGTTCAAACTTCAATGATTGCCTGAAGGTAGCAGCAAGGTGGCATCCTGATGATGCAATGAGAGAAGTCCTGGAAGAAGCCCCTGTTTTCAACCCAACAAAAGCGGAATTCGAAGACACCCTCAAATATATTGCAAGCGTACATTCTAGAGCAGAACATTACGGATGTTGCCGTATTATACCTCCTACTGGTTGGAAACCACCATGTTCTCTCGAGGAAAAGAACGTATGGGAAGGCTCCGAGTTTGTTGCTCAGGTTCAGCGAATTGATGGGCTCCAAGTTCAGCATGCACAAGAAACTGTTGTGAGTTCTTCTGAAAATATAGAAACTAAGAGAAGAAGAGATGCAAAAGTAGCTTTGGAGGCTCAGCTTGGGAATGCAACCACTTGCGCCATAAATAAACAGGTCCAGGAGGTTGAAGACTGTGTGTCTGATCCTGGTCCTAAATTCACTCTTAAGACATTTAAGAAATTTGCTGATGAATTCAAAACACAATACTTCAATTACAATGATGAGAATAAGATAGTGGGTTCTGATTTAGAATCAGCTTTACATCGACAGAAGTGGGAGCCATCTGTGGAGAATATTGAGGGTGAATATGGAAGGATTGTTCAAAATCCAACGGAAGAAATTGAGGTGCTGAGTGGTAACACCTTGGAGGCTGGAGTTTTTAGCAGTGGATTTCCAAAAACTAATGATCCTCTTGAGGAGTACAGTTACCCTGATGCTGAATATTTGAAATCTGGATGGAACTTAAATAACATACATTCACTGCCAGGTTCTCTCATTTCTTTTGAAAGCCCTAAAGCTTCACGCAATTTTGCCCCTCGGGTTCATGTGGGAATGTGCTTTTCTTCGCTCGGCTGGCAAGTTGAAGAGCACCAGTTATACTCATTATCGTACATGCATTTGGGTGAGCCTAAAGTCTGGTATTGTGTCCCGAGAAGATATGCTGACAGCTTTGAAACAGTTAGGAAGAAGTATCTCTTAGACCGGTGTGAAGGACAACCTGATGTTCATGAGAATCTGATGGCGCAATTTCCCTGCTCCGTATTGAAGGCAGAGGGTATACCAGTATACCGTTGTGTTCAGTATCCTCGCGAATTTGTTCTCATATTCTCAGGATCGTATCATTCGGGATTTGACTGTGGTTTCAACTGCTCTGAATCGGTAGGCTTTGCTCCTCTCGAGTGGCTGCTTCATGGGAAAAATGTCATGGAGCAATATTGTGAACAAAGGAGAAAGACATTAATTTCATATGATAAGCTTTTGCTGGAAGCTGCAAGGAAAGCTGTTAGGGCACGATGGGAAATTGATCTTTGCATGGAGAGCACGGCAGACACATTAACATTTAAAGATGCTTATCAAAGAGATGGGATCCTAGCAAAAGCTTTGGGTTCTCGCATCAAGAGTGAAAGTCTCAAGAGGGAATATCTCTGCAAGTCTTTGAGATCACAAAGAATGGATAAAACTTTTGACGCCTTTTGCAAAAGGGTGTGCAGCGTATGTCTGCGCGATTTACACTTGTCAGCAGTAGGTTGTTTTTGTTCTGAAAACAAGTTTGCTTGCCTTGATCACGCGAAACAGTTCTGTCCTTGCACTTGGAGCAACAAAATCCTCTTCTACCGGTACGATATCAGCGAGTTGAATGTTCTTCATCAAGCCTTGGAAGGAAAATTAAGTTCAGTTTATAAATGGGCCAAAGAGGATCTTGGATTAAGCTTTGTGTCTGCTGTCTCCAAGAGATCAAAACAAACCCCAGAAAATACAAGTTGTTCAATGCCACCACCTTCACAAGACTCGAAGATGAATAATACTAAATACAAGTTAGTACTGGATACAAATAATGCGATCTCAAAATGGAATCAACAGAAAGTGCAGGCAACATCGAATACATCAGAAATGAAGCAAAACGAAGTGGTGCCCCAAGTCAAGGGGGCTCGCCGCAGCAAAAATATCAGTCGTTTCAGCATTCAGCCAAAAGACAAGGCAACTTTAACTGAGCCGAAAATCTCCAATATGACGAAAGGAAAAGAGAAAATGCCGGGTATGTCAACAATTTCAAAGAAGGTAAAAGAGGAGCCCAAAGTATCCACTACAGCTGCTTCTTCTGTCAAAAACTTACGTTACCTGTCCTTTCTACAAGAAAACACTTTACTTGAAGTTTCATCTGATAGTACTAGCTCATCTTCATCTTCAGAATCCGATGACACATAA 2568 0.4174 MPMKIYAKMMESGSDVSILKKMGDLSVPPGFASLTSFVLKKGVKVKEVGKSATFLNEYENEPVYMDSDCRMNDINAYNKRPWILVDQSDNKLDESHTEHLPMDRPSNACRPKGTIGGCSNFNDCLKVAARWHPDDAMREVLEEAPVFNPTKAEFEDTLKYIASVHSRAEHYGCCRIIPPTGWKPPCSLEEKNVWEGSEFVAQVQRIDGLQVQHAQETVVSSSENIETKRRRDAKVALEAQLGNATTCAINKQVQEVEDCVSDPGPKFTLKTFKKFADEFKTQYFNYNDENKIVGSDLESALHRQKWEPSVENIEGEYGRIVQNPTEEIEVLSGNTLEAGVFSSGFPKTNDPLEEYSYPDAEYLKSGWNLNNIHSLPGSLISFESPKASRNFAPRVHVGMCFSSLGWQVEEHQLYSLSYMHLGEPKVWYCVPRRYADSFETVRKKYLLDRCEGQPDVHENLMAQFPCSVLKAEGIPVYRCVQYPREFVLIFSGSYHSGFDCGFNCSESVGFAPLEWLLHGKNVMEQYCEQRRKTLISYDKLLLEAARKAVRARWEIDLCMESTADTLTFKDAYQRDGILAKALGSRIKSESLKREYLCKSLRSQRMDKTFDAFCKRVCSVCLRDLHLSAVGCFCSENKFACLDHAKQFCPCTWSNKILFYRYDISELNVLHQALEGKLSSVYKWAKEDLGLSFVSAVSKRSKQTPENTSCSMPPPSQDSKMNNTKYKLVLDTNNAISKWNQQKVQATSNTSEMKQNEVVPQVKGARRSKNISRFSIQPKDKATLTEPKISNMTKGKEKMPGMSTISKKVKEEPKVSTTAASSVKNLRYLSFLQENTLLEVSSDSTSSSSSSESDDT* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0098 855 SMART JmjN_1 143 184 IPR003349 -
Aev06g0098 855 ProSiteProfiles JmjC domain profile. 364 527 IPR003347 -
Aev06g0098 855 SMART cupin_9 361 527 IPR003347 -
Aev06g0098 855 Pfam C5HC2 zinc finger 617 667 IPR004198 -
Aev06g0098 855 SUPERFAMILY Clavaminate synthase-like 263 554 - -
Aev06g0098 855 MobiDBLite consensus disorder prediction 702 721 - -
Aev06g0098 855 ProSiteProfiles JmjN domain profile. 144 185 IPR003349 -
Aev06g0098 855 Pfam JmjC domain, hydroxylase 395 510 IPR003347 -
Aev06g0098 855 PANTHER INACTIVE LYSINE-SPECIFIC DEMETHYLASE JMJ19-RELATED 90 778 - -
Aev06g0098 855 Gene3D Cupin 129 511 - -
Aev06g0098 855 Pfam jmjN domain 145 178 IPR003349 -
Aev06g0098 855 PANTHER LYSINE-SPECIFIC DEMETHYLASE 90 778 - -
Aev06g0098 855 MobiDBLite consensus disorder prediction 791 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0098 Aev-Chr6 794718 799138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0098 26 737 JUMONJI Transcription Factor Family AT1G08620 44.813 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aev06g0098 JmjC 7.5e-33 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0098 - - gmx:100804864 1021.15