Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0089 ATGGGGAGAGCTCCATGCTGCGAGAAAATGGGGTTGAAGAAGGGCCCATGGACTCCAGAGGAAGATCGCATCCTCATCACTTACATCAACTCCTTTGGCCATTCCAATTGGCGTGCCCTCCCCAAACATGCTGGCCTTTTAAGGTGTGGAAAGAGCTGCAGACTCCGGTGGATAAATTATCTAAGGCCTGACATCAAACGTGGCAACTTCACCACGCAAGAAGAGCAAGCAATTATCAGTTTGCATCAAATGCTGGGAAATAGGTATGTATCATAA 276 0.4783 MGRAPCCEKMGLKKGPWTPEEDRILITYINSFGHSNWRALPKHAGLLRCGKSCRLRWINYLRPDIKRGNFTTQEEQAIISLHQMLGNRYVS* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0089 91 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Aev06g0089 91 SMART sant 13 63 IPR001005 -
Aev06g0089 91 SUPERFAMILY Homeodomain-like 15 90 IPR009057 -
Aev06g0089 91 Gene3D - 11 67 - -
Aev06g0089 91 CDD SANT 16 61 IPR001005 -
Aev06g0089 91 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev06g0089 91 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev06g0089 91 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 90 - -
Aev06g0089 91 PANTHER TRANSCRIPTION FACTOR MYB14 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0089 Aev-Chr6 737744 738136 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0089 1 89 MYB Transcription Factor Family AT2G31180 85.393 1.72e-56 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev06g0089 Myb_DNA-binding 6.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0089 K09422 - ath:AT2G31180 174.481