Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0084 ATGGATTTTGATTCCCCTAATAATGTCTTCCACCAATACCAATACCAATACCAATACCAAAACCTTCACTTCTTCCCCTGTTCAAATTCCCCTGCCTCCTCTTATGGAGAACCCTGCTTATGGGATGATGAGTTATTTCTCCTCAACAACACCAATCTCACTCACTCCAACTTCATTGTTGACCACTCAATTTCATCACAATCACAAACCAAGGAATCATCATCATCATCATCAATATCCTCAGCAATTTCCAACAACTCTACTACTTCAGCATCACAAGAAGTGTCCTCCAATAACATCACAACAGCCTATAACAATACAATAACTCCACAAGTGAGTAGTGGTGAAGCAACTCACTCACCACCCCAAACTACACAACCAAAGGAAGGTAGCAAAGAGAAGAGAGCCTACAGAGGAGTAAGAAGAAGGCCATGGGGGAAATTCGCAGCGGAAATAAGGGACTCGACGAGGAATGGAGTTCGAGTTTGGATTGGAACATTTGACACAGCAGAGGCAGCAGCTCTGGCTTATGACCAAGCAGCTCTGTCCACAAGGGGCTCCATGGCAGTACTGAATTTCCCTGAAGAAGTGGTTAGGGAATCATTGAAGGAATTGGCAAGTAAAACTTTTGAAGAAGGTTCATCACCAGTGCTAGCACTCAAGAGGAAACACACCATGAGAAGAAAATCCACCACCACCACCAAGAAGAAGACCAAGTTGGTTGAAAAGGAGGAAAATCGGCTAGAGTACAATGGTGGTGGCTATAATAGTAATAGTAATAATAATATTGGATATGATGATTCACACTTAGATAATGTGCTGGTTTTTGAGGATTTGGGTGCAGAGTATCTAGAGCAACTATTGAGCATGACTACATGTTAA 882 0.4229 MDFDSPNNVFHQYQYQYQYQNLHFFPCSNSPASSYGEPCLWDDELFLLNNTNLTHSNFIVDHSISSQSQTKESSSSSSISSAISNNSTTSASQEVSSNNITTAYNNTITPQVSSGEATHSPPQTTQPKEGSKEKRAYRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAEAAALAYDQAALSTRGSMAVLNFPEEVVRESLKELASKTFEEGSSPVLALKRKHTMRRKSTTTTKKKTKLVEKEENRLEYNGGGYNSNSNNNIGYDDSHLDNVLVFEDLGAEYLEQLLSMTTC* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0084 293 ProSiteProfiles AP2/ERF domain profile. 136 194 IPR001471 GO:0003700|GO:0006355
Aev06g0084 293 MobiDBLite consensus disorder prediction 110 127 - -
Aev06g0084 293 Gene3D AP2/ERF domain 136 196 IPR036955 GO:0003700|GO:0006355
Aev06g0084 293 PRINTS Ethylene responsive element binding protein signature 137 148 IPR001471 GO:0003700|GO:0006355
Aev06g0084 293 PRINTS Ethylene responsive element binding protein signature 160 176 IPR001471 GO:0003700|GO:0006355
Aev06g0084 293 MobiDBLite consensus disorder prediction 110 140 - -
Aev06g0084 293 MobiDBLite consensus disorder prediction 65 97 - -
Aev06g0084 293 CDD AP2 137 195 IPR001471 GO:0003700|GO:0006355
Aev06g0084 293 SMART rav1_2 136 200 IPR001471 GO:0003700|GO:0006355
Aev06g0084 293 SUPERFAMILY DNA-binding domain 136 195 IPR016177 GO:0003677
Aev06g0084 293 Pfam AP2 domain 137 186 IPR001471 GO:0003700|GO:0006355
Aev06g0084 293 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 22 290 - -
Aev06g0084 293 PANTHER DNA-BINDING DOMAIN 22 290 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0084 Aev-Chr6 702122 703003 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0084 132 288 AP2-EREBP Transcription Factor Family AT3G23240 57.325 2.58e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev06g0084 AP2 1.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0084 K14516 - gmx:100780775 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0084 06 702122 703003 Aev02g0789 02 6701965 6702801 PCT