Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0081 ATGGCATTGAACCAAAACCACTCTCACAAGCTTGAATATCACACACCACAACCTGCTTCAGACCCTTCACTGCTCATATTTGCCCTTGTTGTTCCCATAATCTTGGCCACAGCTTTCATACTCATCAGCTACTTAACTTTTGTTACCAAATGCTGCTCAAATTGGCATCCAATGAGGTTGGTTTCAATCCTGAGAGCTCCACAGAATGAAGAACCCTTCATAGCATTCTCTCCAAGGATGTGGAACTTTGGCCTTGATGAATCTGCCATCAAAGAAATCCCAACATTTCAATTCACAAAAAGAGAAGGAGATGGTGATGATCAGGACAAAAGTGTGCATAGTTGTGTGGTTTGTTTGACAGAGTTTCAAGAACAGGACATGCTTAAGGTTCTGCCAAATTGCAGCCATGCATTTCACTTGGATTGCATTGATATTTGGCTTCAAACCAATGCAAATTGCCCTCTTTGTAGATCAAGCATTGCTGGCAACAGACACTGTCCAATTATTGACCACATCATAGCACCAAGCTCTTCTCCTCAGGACTCTCAACTTCTCTCTAACATGGGAAGTGATGAAGATTTTGTGGTCATTGAAATTGGGGGAGAACATGGGGGAACACTGCCACAGATGCAGCAAGAAGTGGAGGATGATGATGACTCAAGGGAAAGGACAAGGAAGATGGTGCAGTTGATGAAACCAAGGAAGTGCCACCATGTTTCCATCATGGGAGATGAGTGCATTGATGTTAGAAAGAAAGATGATCAGTTTTGTACTATTCAGCCTATTAGAAGATCTTTCTCAATGGATTCTGCTAATGATAGACAAGTTTACTTGGATGTTCAAGCCATCATACAACAAAATAGACATCAGAATGAGGCCAGTGCCAGTGAAGATTGCAGTAGTAGCAGAAATCGAAGATCATTCTTTCCATTTCGTTATGGCCGGGGATCGAAAAGCGCAGTCCTTCCTCTGGAGAATGAGGTCTAA 987 0.4245 MALNQNHSHKLEYHTPQPASDPSLLIFALVVPIILATAFILISYLTFVTKCCSNWHPMRLVSILRAPQNEEPFIAFSPRMWNFGLDESAIKEIPTFQFTKREGDGDDQDKSVHSCVVCLTEFQEQDMLKVLPNCSHAFHLDCIDIWLQTNANCPLCRSSIAGNRHCPIIDHIIAPSSSPQDSQLLSNMGSDEDFVVIEIGGEHGGTLPQMQQEVEDDDDSRERTRKMVQLMKPRKCHHVSIMGDECIDVRKKDDQFCTIQPIRRSFSMDSANDRQVYLDVQAIIQQNRHQNEASASEDCSSSRNRRSFFPFRYGRGSKSAVLPLENEV* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0081 328 ProSiteProfiles Zinc finger RING-type profile. 115 157 IPR001841 -
Aev06g0081 328 SMART ring_2 115 156 IPR001841 -
Aev06g0081 328 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 162 IPR013083 -
Aev06g0081 328 PANTHER RING-H2 FINGER PROTEIN ATL16 5 325 IPR044600 GO:0016567|GO:0016740
Aev06g0081 328 Pfam Ring finger domain 114 157 IPR001841 -
Aev06g0081 328 SUPERFAMILY RING/U-box 89 161 - -
Aev06g0081 328 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 325 - -
Aev06g0081 328 CDD RING-H2_PA-TM-RING 115 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0081 Aev-Chr6 684230 685216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0081 19 290 C3H Transcription Factor Family AT1G04360 44.186 5.43e-76 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0081 K19041 - gmx:100809883 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0081 06 684230 685216 Aev06g0081 06 684230 685216 ECH
Aev02g0780 02 6596062 6597012 Aev06g0081 06 684230 685216 PCT