Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0075 ATGGCCTCTTCTGGAAGTGGAAACAATGGGTCTGGATCACCGTGTGGGGCGTGCAAGTTCCTAAGGAGAAAGTGTGCATCAGACTGCGTATTTGCACCATATTTCAGCTCAGAGCAAGGGCCGGCCAGATTCGCGGCCATTCACAAGGTGTTTGGTGCAAGCAACGTTTCCAAGCTGCTGCTTCATATACCAGCTCACGATCGCTGTGAGGCTGTTGTTACTATTGCTTATGAGGCTCAGGCTCGTATCAGAGACCCCGTTTATGGCTGTGTCTCCCACATTTTTGCCTTACAACAACAGGTAGCGTGTTTGCAGGCACAAGTGATGCATCTGAAGGGTCAGCTGGCACAGCAGCAAATGGAATGCAGTAGGAACACAGAGAATCAGTGGTCAGCAGGAGGGAATGTTACCGTTACAGGACAAGCCATGAATAATCCATTTTGTCCAACTAATTACCTGAATTACCCTATTTCTCCTCAGAGCTCCCTTGACTCAATTGATCACACCACCACCACCATCAATGATAATAATGGAATTGGCATGCAAGATGATGATTTCTCATTCCAAGCTTGTTCTAAGAGAAAATCATCATCTTCATACAACAACAATGACTTGGGTGAGCTTCAAGAACTAGCACTCAGGATGATGAGGAACTGA 657 0.4658 MASSGSGNNGSGSPCGACKFLRRKCASDCVFAPYFSSEQGPARFAAIHKVFGASNVSKLLLHIPAHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQVMHLKGQLAQQQMECSRNTENQWSAGGNVTVTGQAMNNPFCPTNYLNYPISPQSSLDSIDHTTTTINDNNGIGMQDDDFSFQACSKRKSSSSYNNNDLGELQELALRMMRN* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0075 218 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Aev06g0075 218 PANTHER LOB DOMAIN-CONTAINING PROTEIN 16 1 217 - -
Aev06g0075 218 Coils Coil 101 121 - -
Aev06g0075 218 ProSiteProfiles LOB domain profile. 13 115 IPR004883 -
Aev06g0075 218 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0075 Aev-Chr6 620807 623363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0075 1 218 AS2 family AT2G42430 57.551 7.37e-83 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev06g0075 LOB 1.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0075 K13944 - gmx:100801508 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0075 06 620807 623363 Aev06g0075 06 620807 623363 ECH
Aev06g0075 06 620807 623363 Aev02g0768 02 6469484 6476462 PCT