Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0067 ATGACGGCAGAGAGGTTTTGTGAGAGCGAAGAAGAGAAGGCTATGTTGGAATCTGTGTTGGGAACTGAAGCTGTTGCCTTCTTCAGTTCAGCAATTTCCAAGGATGTTTTTTCCGAGGTAATTGTTCCTCCTGGTACCGATTTGGGCCTCCACCAGCAGTTATGCCACCTTGTTGAGGCGTCCAAGTGGGACTATGCCATTTTCTGGCAGGTTGTTGGATTGAAATCCGGTATCTTTGCCTTGATTTGGGGCGATGGGCACTTTCAGGATCCCAGCGGGGATCAGAGGAATGACCACGAAGATGAGGCCAGGCAGCGTGTGCTGCAGAAGCTTCATGCCTCTTGTGGTGCGTCTGATTCCAAAGAGGCTGTGTATCCAAGGTTGAATGGGGTCTCAGATGTGCAGATGTTTTTCTTGACCTCAAAGTTTTATTTGTTTGGATTTGATTCGCAGTGTGGCCCTGTTAGCTCTTTTAAGGTTGGTAAATCAATTTGGGCTTCTGATGCTGCTAGTTGCTTGGACCAATATGAATCAAGGTCATTCCTGGCGAAATTGGCCGGTTTTCAAACAGCTGTCTTTGTGCCTCTCAAGGCCGGAGTTATCGAGCTTGGTTCAACAAAATTGATGCCTGAAGATCATGGTCTTTTGGAGATGGTCAGGACAACATTTGGGGAATCTAGTTCTGCTCAGGCTAAGGCGTTGCCCAAGATTTTTGGGCGTGAATTAAGCCTGGGGGATACGAAGTCTCAGTCCCTAAGTATTAGTTTCTCCCCGAAGATGGAAGATGATTCTGGTTTCACTTCTGACTCTCATGAAGTACATGCTTTAGGGGCAAACAATGCTTTAGGAAATTCTTCCAATGGTTGTCTAGGGGACAGTAATGAATCAAGATTGTTCCCGGAGTTGAATCCAATGATTGCTGGGAATTTCAATCTTCAAGCAAATGAAGACTCACTTCCAGATGAACGGAAGCCTAGAAAAAGAGGGAGAAAGCCTGCCAATGGGAGGGAGGAACCACTGAATCATGTCGAAGCAGAGAGACAAAGACGGGAGAAGCTTAATCAGAGGTTCTATGCTTTGAGAGCTGTTGTTCCTAACATATCTAAAATGGATAAGGCATCGCTGCTTGGCGATGCTATTTCCCATATCACTGATCTCGAGAAGAAGATCAAGGCCTTGGAAGCTGAAAAAGGCATGATTAACATCGACCAGAAGTTGCCTTTCCCGGGTATCGATTTTCAGGCTAGAAAGGATGACGCAGTTGTAAGAGTGAGCTTCCCCTTGGATACTCACCCAGTTTGCGGAGTTGTTAAAACACTCAGGGAGCATCAGATTGTGGCTCAAGAGTCCAGTGTCTCGACTGCGCAGGATAAGGTAATTCATACATTCTCCATAAGAACTCATGGTGGAGAAGCTGCTGCTGTACAGTTGAAAGAAAAGCTTGAAGCATCTCTGTTAAAAATCTGA 1467 0.4588 MTAERFCESEEEKAMLESVLGTEAVAFFSSAISKDVFSEVIVPPGTDLGLHQQLCHLVEASKWDYAIFWQVVGLKSGIFALIWGDGHFQDPSGDQRNDHEDEARQRVLQKLHASCGASDSKEAVYPRLNGVSDVQMFFLTSKFYLFGFDSQCGPVSSFKVGKSIWASDAASCLDQYESRSFLAKLAGFQTAVFVPLKAGVIELGSTKLMPEDHGLLEMVRTTFGESSSAQAKALPKIFGRELSLGDTKSQSLSISFSPKMEDDSGFTSDSHEVHALGANNALGNSSNGCLGDSNESRLFPELNPMIAGNFNLQANEDSLPDERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAISHITDLEKKIKALEAEKGMINIDQKLPFPGIDFQARKDDAVVRVSFPLDTHPVCGVVKTLREHQIVAQESSVSTAQDKVIHTFSIRTHGGEAAAVQLKEKLEASLLKI* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0067 488 CDD bHLH_AtAIB_like 334 397 - -
Aev06g0067 488 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 50 223 IPR025610 -
Aev06g0067 488 Pfam Helix-loop-helix DNA-binding domain 341 387 IPR011598 GO:0046983
Aev06g0067 488 MobiDBLite consensus disorder prediction 317 348 - -
Aev06g0067 488 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 337 386 IPR011598 GO:0046983
Aev06g0067 488 PANTHER MYC 3 486 IPR045084 GO:0003700|GO:0006355
Aev06g0067 488 Coils Coil 376 403 - -
Aev06g0067 488 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 338 409 IPR036638 GO:0046983
Aev06g0067 488 MobiDBLite consensus disorder prediction 313 348 - -
Aev06g0067 488 Gene3D - 330 401 IPR036638 GO:0046983
Aev06g0067 488 PANTHER TRANSCRIPTION FACTOR BHLH3 3 486 - -
Aev06g0067 488 SMART finulus 343 392 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0067 Aev-Chr6 540230 541696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0067 3 485 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 48.065 1.94e-154 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev06g0067 bHLH-MYC_N 3.5e-38 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0067 - - gmx:100782107 660.218