Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0061 ATGTCGTCGGAAGAACCAACCGTGGTCGTGGAGCCCCCGCCGGCGGAGCCCGTAGGTCCCGCTGACCCACCTCAGGAGACAGAGCCCGAAAAGCCCGCTACGAAGCCCAAGAAGGCTGCCAAGGAGCCCAAACCCAAGAAGCCCGCTGCTTCCAGATCCCGGAACCCTTCCGCTCACCCTCCCTACGAAGAGATGATTAAGGACGCGATTGTCACGTTGAAGGAGAAGAATGGTTCCAGCCAATACGCGATTGCGAAGTTCACCGAAGAGAAGCACAAGCAGCTACCTGCGAACTTCAGGAAGCTATTGTTGTACCATTTGAAGAAGCTCGTTGCTTCTGGGAAGCTCGTTAAGGTCAAGGGATCATTCAAGATTCCGGCTAAGTCTTCGGCTGCAAAGCCTGCTGCTCCAGCGAAGAAGAAGCCCGCGGCTGCTGCTAAGCCAAAGTCTAAACCCAAGCCCAAATCTAAGGCCGCACCAAAGGCTAAAGACACCAAGACTACCAAGTCAGCGGCTGCTAAAGCGCCTGCTAAGGCTAAGCCTGCTGCTAAACCCAAGCCCAAAGCTAAGCCTGCTGCCAAGCCCAAGGCTGCTGCTAAGCCCAAGGCCGCTCCGGCTAAGGCAAAGTCGGCGGCTGCTGCTAAGGCGAAGCCAGCTGCGAAGGCTAAGCCAGCCGCTAAGCCCAAGCCCAAGCCCAAGGAGAGGCCTGCTAAGGCTTCAAGAACGTCGACGAGAACTTCTCCAGGGAAGAAAGCCCCTGCTCCCAAGCCGGTGGCGAAGAAGGCCACGCCGGCGAAGAAGGCTCCGGCGAAGAATGTGAAGGCGAAGAGTGCGAAATCTCCGGCGAAGAAGGCGGCTGCGGTGAAGAAGGGAAAGAAGTGA 882 0.576 MSSEEPTVVVEPPPAEPVGPADPPQETEPEKPATKPKKAAKEPKPKKPAASRSRNPSAHPPYEEMIKDAIVTLKEKNGSSQYAIAKFTEEKHKQLPANFRKLLLYHLKKLVASGKLVKVKGSFKIPAKSSAAKPAAPAKKKPAAAAKPKSKPKPKSKAAPKAKDTKTTKSAAAKAPAKAKPAAKPKPKAKPAAKPKAAAKPKAAPAKAKSAAAAKAKPAAKAKPAAKPKPKPKERPAKASRTSTRTSPGKKAPAPKPVAKKATPAKKAPAKNVKAKSAKSPAKKAAAVKKGKK* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0061 293 PANTHER HISTONE H1 2 293 - -
Aev06g0061 293 MobiDBLite consensus disorder prediction 28 49 - -
Aev06g0061 293 MobiDBLite consensus disorder prediction 10 27 - -
Aev06g0061 293 CDD H15 56 124 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aev06g0061 293 SUPERFAMILY "Winged helix" DNA-binding domain 55 139 IPR036390 -
Aev06g0061 293 PANTHER HISTONE H1.1 2 293 - -
Aev06g0061 293 SMART h15plus2 56 122 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aev06g0061 293 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 58 127 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aev06g0061 293 MobiDBLite consensus disorder prediction 1 68 - -
Aev06g0061 293 PRINTS Histone H5 signature 206 225 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Aev06g0061 293 PRINTS Histone H5 signature 45 66 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Aev06g0061 293 PRINTS Histone H5 signature 184 201 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Aev06g0061 293 PRINTS Histone H5 signature 149 163 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Aev06g0061 293 PRINTS Histone H5 signature 72 89 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Aev06g0061 293 MobiDBLite consensus disorder prediction 125 293 - -
Aev06g0061 293 Pfam linker histone H1 and H5 family 59 125 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aev06g0061 293 Gene3D - 54 133 IPR036388 -
Aev06g0061 293 MobiDBLite consensus disorder prediction 181 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0061 Aev-Chr6 502640 503634 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0061 60 126 Single Myb Histone (SMH) Gene Family AT1G72740 38.806 4.42e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0061 K11275 - twl:120007504 140.969