Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0059 ATGCCTCCTGCTTCTGAATCACTCACAATCCACGCACCACCTCATGGGCCTCCTCAGCCCATCAGGGCCCATAACCAGGCCCATTTCCGCGGCGTCCGTAAGCGCCCATGGGGCCGGTTTGCCGCCGAGATCCGCGACCCGTGGAAGAAGACCCGCAAGTGGCTCGGCACCTTCGACACCGCCGAGGAAGCCGCCAGGGCCTACGACCAAGCCGCCAGGACCCTCCGCGGCTCCAAGGCCAAGACCAACTTCTCCTACGCTGCCCTTCCCATTCCGCCGCCGTACATCCCCGGCGCCGCCGGTGACAGCGCTGGCATGTTTGGGAGGCGCGTGGGGTTTTGGACCCCATCCCCGGCGTACTTCGCGACAGGGGTGGCCGCCGGAGCAGCGCCGGTGAGGTCGGAGTACAAGGGATACAAATTGGAGAATGTGGATGTTGTGCTGAGCAAGGAAGAAGAGAAGGTGCGGAAGGAGAAGAAGCCGTTTTTGTTCGACCTTAATCAACCGGCGCCTCTATTTTGA 522 0.6264 MPPASESLTIHAPPHGPPQPIRAHNQAHFRGVRKRPWGRFAAEIRDPWKKTRKWLGTFDTAEEAARAYDQAARTLRGSKAKTNFSYAALPIPPPYIPGAAGDSAGMFGRRVGFWTPSPAYFATGVAAGAAPVRSEYKGYKLENVDVVLSKEEEKVRKEKKPFLFDLNQPAPLF* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0059 173 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 23 107 - -
Aev06g0059 173 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 23 107 - -
Aev06g0059 173 ProSiteProfiles AP2/ERF domain profile. 28 85 IPR001471 GO:0003700|GO:0006355
Aev06g0059 173 SUPERFAMILY DNA-binding domain 28 86 IPR016177 GO:0003677
Aev06g0059 173 CDD AP2 27 84 IPR001471 GO:0003700|GO:0006355
Aev06g0059 173 Pfam AP2 domain 28 77 IPR001471 GO:0003700|GO:0006355
Aev06g0059 173 SMART rav1_2 28 91 IPR001471 GO:0003700|GO:0006355
Aev06g0059 173 Gene3D AP2/ERF domain 27 86 IPR036955 GO:0003700|GO:0006355
Aev06g0059 173 MobiDBLite consensus disorder prediction 1 23 - -
Aev06g0059 173 PRINTS Ethylene responsive element binding protein signature 29 40 IPR001471 GO:0003700|GO:0006355
Aev06g0059 173 PRINTS Ethylene responsive element binding protein signature 51 67 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0059 Aev-Chr6 480760 481281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0059 26 84 AP2-EREBP Transcription Factor Family AT5G44210 86.441 1.43e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev06g0059 AP2 5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0059 K09286 - zju:107425904 186.808