Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0047 ATGGAGCTGAATCTGAAGGCCACAGAGCTGAGGTTGGGATTGCCGGGAATCGATGAGGTGGAGGAGAAGGTTTCATCATCGTGTAGTGGGGGCTATGTTGTTAGAAGCAGTAGTAGTAACAAGAGATCTTCACCGGAACAAGAGTGCTGCAAGAGCAACGTTGATTCTAATGCCACCACTACTGAGGAGGATGACAATAATATTGTGCAACCTGCAAAGGTGCAAGTAGTGGGATGGCCACCAATTCGATCTTATAGGAAGAACAGTATGCAGCAGCAGAGGAAGAAGAAGGACAGTGGTGATGGAATGTTTGTGAAAGTGAGCATGACAGGGGCTCCTTACCTGAGGAAGATAGATGTGAAGGTGTATAAGAGCTACTCTGAGCTCCTCAAGGCCTTGCAGAATTTGTTCAACTGCACTTTTGGTGAATACTCAGAAAGGGAAGGGTACAATGGATCTCAACATGTTCCTACCTACGAAGATAAGGATGGTGACTGGATGCTTGTTGGAGATGTTCCATTTCAAATGTTCATGTCCTCCTGCAAGAGGCTCAGAATTATGAAAGGATCGGAAGCAAAGGGATTGGGTTGTTTCTGA 597 0.459 MELNLKATELRLGLPGIDEVEEKVSSSCSGGYVVRSSSSNKRSSPEQECCKSNVDSNATTTEEDDNNIVQPAKVQVVGWPPIRSYRKNSMQQQRKKKDSGDGMFVKVSMTGAPYLRKIDVKVYKSYSELLKALQNLFNCTFGEYSEREGYNGSQHVPTYEDKDGDWMLVGDVPFQMFMSSCKRLRIMKGSEAKGLGCF* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0047 198 PANTHER AUXIN-INDUCED PROTEIN 2 196 - -
Aev06g0047 198 MobiDBLite consensus disorder prediction 27 67 - -
Aev06g0047 198 ProSiteProfiles PB1 domain profile. 102 189 IPR000270 GO:0005515
Aev06g0047 198 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 2 196 IPR003311 GO:0005634|GO:0006355
Aev06g0047 198 Gene3D - 96 198 - -
Aev06g0047 198 SUPERFAMILY CAD & PB1 domains 94 188 - -
Aev06g0047 198 Pfam AUX/IAA family 8 196 IPR033389 -
Aev06g0047 198 MobiDBLite consensus disorder prediction 29 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0047 Aev-Chr6 391602 392511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0047 88 195 B3 DNA Binding Superfamily AT2G46530 31.481 2.34e-09 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Aev06g0047 AUX_IAA 2e-56 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0047 K14484 - gmx:100792134 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0047 06 391602 392511 Aev02g0720 02 5961511 5963075 PCT