Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0046 ATGGCCAACAACCCTTCCGAGGCTCCCGCCGATGACTTCCTCGAACAAATCCTTGGCCTCCCGACCTTCGCCTCCGCCGACTCTTCCCTCGCCGGACCCGACGTCGCCGGCCTCACGGCTCCGATGATGCTTCAGCTCAACTCCGGCGACGCTAGCCACCACCTCGCCGCCGGAGGAGGAGGAGGGTTTCATGCGCCGGTGTATGGGTTAGGGCTGAGCTTGGAGCAAGGAAAAGGAGGAGCTGGAGGAGGGTTCTTGAAGCCCCCTGAGGAGGCTTCCGGTAGCGGGAAGCGCTTTCGCGACGACGCCGTTGATGGGAGAGCTAAGAATATTTTTCATGGGCAACCCATGCCTACTACTATTCCCACGGCGCCACATCCTCCAGCAATGCGTCCTCGGGTGCGGGCTAGGAGAGGACAGGCTACAGACCCACACAGCATAGCTGAACGGTTGCGCAGAGAAAGAATAGCAGAAAGAATCAGGTCTTTGCAAGAACTGGTTCCAAGTGTCAACAAGGCATATAGAGCTGCCATGTTAGATGAAATTGTGGATTATGTCAAGTTCTTAAGGCTTCAAGTAAAGGTTTTGAGCATGAGTAGATTGGGTGGAGCTGGTGCAGTCGCACCACTGGTAACTGACATCCCATTATCATCAGTTGAGGAGGAAGGCAGCGAAGGCGGAAGAAACCGGCCAGCTTGGGATAAGTGGTCGACTGATGGCACAGAAAGGCAGGTAGCTAAGCTTATGGAGGAAAATGTTGGTGCTGCCATGCAGTTTCTTCAATCAAAGGCGCTCTGCATCATGCCCATCTCACTGGCCTCAGCAATATACCAGTTGCAGCCCCCTGACACCTCTAGTATAGTGAAGCCTGAAACTAACCCTCCTTCATAG 891 0.5466 MANNPSEAPADDFLEQILGLPTFASADSSLAGPDVAGLTAPMMLQLNSGDASHHLAAGGGGGFHAPVYGLGLSLEQGKGGAGGGFLKPPEEASGSGKRFRDDAVDGRAKNIFHGQPMPTTIPTAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPSVNKAYRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGGRNRPAWDKWSTDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQLQPPDTSSIVKPETNPPS* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0046 296 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 140 189 IPR011598 GO:0046983
Aev06g0046 296 SMART finulus 146 195 IPR011598 GO:0046983
Aev06g0046 296 Gene3D - 140 200 IPR036638 GO:0046983
Aev06g0046 296 Pfam Helix-loop-helix DNA-binding domain 145 189 IPR011598 GO:0046983
Aev06g0046 296 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 138 199 IPR036638 GO:0046983
Aev06g0046 296 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 279 - -
Aev06g0046 296 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 279 - -
Aev06g0046 296 MobiDBLite consensus disorder prediction 93 108 - -
Aev06g0046 296 MobiDBLite consensus disorder prediction 79 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0046 Aev-Chr6 383400 386812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0046 63 295 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 76.987 1.37e-113 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev06g0046 HLH 2.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0046 - - gmx:100797789 426.017