Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0043 ATGGACACTCACGGCGCGGGACCCCTCCGCTCCCGCAGTTCGCAGTCCCCTTCGCCCTCCCACTCCGCCTCCGCCTCCGCCACCTCATCAATCCACAAGCGCAAGCTCGCATCTGAGGACCACGCGCCTCCCTTCCCACCCTCATCCTTCTCTGCCGACACTCGCGACGGCGCCCTCACCTCCAACGACGACCTCGAGAGCATCTCCGCTCGCGGTGCCGACTCCGACTCCGACGCTGACGATTCCGAGGACGCCGTCGTCGACGACGACGAGGACGACTACGACAACGACTCCTCCATGCGCAACTTCACCGCCGCCAGGCTCGACGGAGCCGGTGGTGGCGCCTCCGCGCCGCGCAACACCAAGCTCAAGGTTGATAATTCCGCCACTGTGAAGATCGAGAATTCGGACGGAGCCAAGGACGCCGGAGCCGCCGGGAGCGCCGCTGCCGTCGGTGCCGTCGCCGTAGCTGGCGGAGTCCCAGGCATTGTGGTGAAGGAGGATGCGAGTAAGATATTTACGGATAATTTGCAGACGAGTGGGGCTTACAGTGCCAGGGAAGAGAGTTTAAAGAAAGAGGAGGAAGCAGGAAAGCTCAAATTTGTGTGCTATTCGAATGATGGTATTGATGAGCATATGGTTTGGTTGATAGGATTGAAGAATATATTTGCCAGACAACTTCCTAATATGCCAAAGGAGTACATTGTCCGACTTGTTATGGATAGGAGCCACAAGTCCGTGATGGTTATAAGGCGTAATCACGTTGTTGGAGGCATTACATATCGCCCATATGTAAGCCAGAAGTTTGGTGAGATAGCCTTTTGCGCAATTACAGCTGATGAGCAAGTAAAAGGTTATGGTACAAGATTGATGAATCACTTAAAACAGCATGCACGTGATGTAGATGGGCTGACACATTTTCTAACATATGCCGACAATAATGCTGTTGGATATTTTATCAAACAGGGATTTACGAAAGAGATTCACTTGGATAAAGATCGATGGCAAGGGTATATAAAGGATTATGATGGAGGAATTCTCATGGAGTGCAAGATTGATCCCAAGCTCCCTTACATTGATTTGTCAACAATGATTCGTCGTCAAAGGCAGGCGATTGATGAAAAGATCAGAGAGCTGTCAAACTGTCACATTGTTTATGCTGGCATTGATTTCCAGAAGAAAGAAGCTGGTATTCCTAAAAAAATTATCAAAGTTGAGGATATCCCTGGTTTGAGAGAAGCTGGTTGGACTCCTGATCAGTGGGGTCATTCGCGATTCAGAAGTCCAAGCAATTCTACAGACAACGCTACCAATCAAAAACATTTGACAGCATTTATGCGTTCACTTCTAAAGTCAATGCACGATCATGCCGATGCGTGGCCATTCAAGGATCCGGTCGATGCACGCGATGTTCCTGATTATTATGATATCATTAAAGATCCAATGGATTTGAAGACAATGACAAAGAGGGTGGAATCTGAGCAATATTACGTGACATTTGAGATGTTTGTTGCTGATGTCAAAAGAATGTTTGCAAATGCGCGCACCTATAACTCTCCAGAAACCATCTATTACAAATGTGCTACAAGATTAGAATCCCACTTTCAGAGCAAAGTGACATCAGTTCTACAATCTGGTGCCAAAATTCAGTAA 1653 0.4846 MDTHGAGPLRSRSSQSPSPSHSASASATSSIHKRKLASEDHAPPFPPSSFSADTRDGALTSNDDLESISARGADSDSDADDSEDAVVDDDEDDYDNDSSMRNFTAARLDGAGGGASAPRNTKLKVDNSATVKIENSDGAKDAGAAGSAAAVGAVAVAGGVPGIVVKEDASKIFTDNLQTSGAYSAREESLKKEEEAGKLKFVCYSNDGIDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTKEIHLDKDRWQGYIKDYDGGILMECKIDPKLPYIDLSTMIRRQRQAIDEKIRELSNCHIVYAGIDFQKKEAGIPKKIIKVEDIPGLREAGWTPDQWGHSRFRSPSNSTDNATNQKHLTAFMRSLLKSMHDHADAWPFKDPVDARDVPDYYDIIKDPMDLKTMTKRVESEQYYVTFEMFVADVKRMFANARTYNSPETIYYKCATRLESHFQSKVTSVLQSGAKIQ* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0043 550 ProSitePatterns Bromodomain signature. 459 517 IPR018359 -
Aev06g0043 550 ProSiteProfiles Bromodomain profile. 454 525 IPR001487 GO:0005515
Aev06g0043 550 MobiDBLite consensus disorder prediction 1 101 - -
Aev06g0043 550 MobiDBLite consensus disorder prediction 77 96 - -
Aev06g0043 550 Pfam Bromodomain 447 529 IPR001487 GO:0005515
Aev06g0043 550 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 206 358 IPR016181 -
Aev06g0043 550 PANTHER GH11602P 8 550 IPR037800 GO:0004402
Aev06g0043 550 MobiDBLite consensus disorder prediction 53 68 - -
Aev06g0043 550 Gene3D - 195 359 - -
Aev06g0043 550 MobiDBLite consensus disorder prediction 8 32 - -
Aev06g0043 550 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 199 353 IPR000182 GO:0016407
Aev06g0043 550 PANTHER BNAC04G26160D PROTEIN 8 550 - -
Aev06g0043 550 SMART bromo_6 435 544 IPR001487 GO:0005515
Aev06g0043 550 SUPERFAMILY Bromodomain 423 542 IPR036427 GO:0005515
Aev06g0043 550 Gene3D - 424 548 IPR036427 GO:0005515
Aev06g0043 550 PRINTS Bromodomain signature 471 487 IPR001487 GO:0005515
Aev06g0043 550 PRINTS Bromodomain signature 506 525 IPR001487 GO:0005515
Aev06g0043 550 PRINTS Bromodomain signature 457 470 IPR001487 GO:0005515
Aev06g0043 550 Pfam Acetyltransferase (GNAT) family 246 324 IPR000182 GO:0016407
Aev06g0043 550 CDD NAT_SF 246 300 - -
Aev06g0043 550 CDD Bromo_gcn5_like 442 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0043 Aev-Chr6 366909 372030 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Aev06g0043 Bromodomain 1.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0043 K06062 - gmx:100813942 867.455