Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0027 ATGTTCCCCACAGCTCCACCTTTGTCGGAAGAAGCAGCATCTGCCACCAGTAGCGGCGTTTCTTCTTCTTATTATTATTATCCAGCAGCACCAGCAAGGGTTTCATCACTTCTTCATCAGGACTTCAATGCCCTAAACAACAACGTCATCTCAACCATCGTCTCATCACTTCATCATCATCCACACCCTCAAAAGATCAACAAAAAGAGAAGCCTTCCTGGGAACCCAGAGCCAGATGCTGAAGTGATAGCGTTGTCCCCGAAGAGCCTTTTGGCGACGAATAGGTATGTTTGCGAGATCTGCCAGAAGGGTTTCCAGAGAGAACAGAATCTGCAGCTGCATAGGAGAGGGCACAACCTGCCGTGGAAGCTGAAGAAGCAAAGGAGCAAGAACAAGGAGGAGGGGGTGGTGGTGAAGAAGAAAGCATATGTTTGCCCTGAACCTTCGTGCGTGCACCACAACCCTTCAAGGGCTCTGGGGGACCTCACGGGGATCAAGAAGCACTACTGCAGAAAGCATGGAGAGAAGAAGTGGAAGTGTGACAGGTGCTCTAAGCTCTATGCCGTTCAATCGGATTGGAAGGCTCATTCCAAAACCTGTGGGACTAGACAATACACCTGTGATTGTGGAGCCATTTTCTCCAGGAAGGATAGCTTCATAACACACAGGGCGTTCTGTGATGCACTGGCTGAAGAAACTGAAAGACTATCAGCAACCCAAATAGCCGCCGCCACAAACCCACTGCTCCTCCACTCTCTCTTCCTCTTCCCATCAACCCACCAAGGCAGCTTCCATAACCACCACACCAGTCCCTGGAACTCATCATTATCGTCATCTCATCAAAACCCTAACCCTAACCCTAACCCTAGCATCATCATCAACAATAACAATAACAATAACAATAACAATAATAATAGTTTCCACATCAAGCCCGAACCTCAAACCCTGATCTCTTCTCCCTTAACACTTGTTCAACATCTTCAAAACCACAACGCCAGGAGGCTCCACGTCGCCTCCTCTAGTGCCGCCACGTCAGCAACCGCGTTGCTCCAAATGGCTGCGACCGTTGGTGCCATCACTACTACTACTACTACTACTGGCCCTGCAGCATCATCAGTACTGGGTCACGTGACTCGGCTCAGTAGTGAGGCGGGCGAGTTTGGAAGGGCGAGTCAACAACAACAACAGCAACTCGACTCGGTAATGATGGGCATGAGATCAGATCAGCAGCTCAAGAGCCAACACCACCACCGTCTCACGAGGGACTTTCTGGGACTCACGACGGTGGTTGATGCCGCCAACGCTAGAAGCGGCGGTGCGGTTGACGTTAGCATGGACGTCAAGGATAGGCTAACGTTCACGGGGCGTACTGTAGAGTACCAGCAGCACCAAAGTTTTGGATTCTTTAGGACTGCGCCGGACACGTGGGGGAATTGA 1437 0.5066 MFPTAPPLSEEAASATSSGVSSSYYYYPAAPARVSSLLHQDFNALNNNVISTIVSSLHHHPHPQKINKKRSLPGNPEPDAEVIALSPKSLLATNRYVCEICQKGFQREQNLQLHRRGHNLPWKLKKQRSKNKEEGVVVKKKAYVCPEPSCVHHNPSRALGDLTGIKKHYCRKHGEKKWKCDRCSKLYAVQSDWKAHSKTCGTRQYTCDCGAIFSRKDSFITHRAFCDALAEETERLSATQIAAATNPLLLHSLFLFPSTHQGSFHNHHTSPWNSSLSSSHQNPNPNPNPSIIINNNNNNNNNNNNSFHIKPEPQTLISSPLTLVQHLQNHNARRLHVASSSAATSATALLQMAATVGAITTTTTTTGPAASSVLGHVTRLSSEAGEFGRASQQQQQQLDSVMMGMRSDQQLKSQHHHRLTRDFLGLTTVVDAANARSGGAVDVSMDVKDRLTFTGRTVEYQQHQSFGFFRTAPDTWGN* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0027 478 ProSiteProfiles Zinc finger C2H2 type domain profile. 96 118 IPR013087 -
Aev06g0027 478 SMART c2h2final6 143 173 IPR013087 -
Aev06g0027 478 SMART c2h2final6 96 118 IPR013087 -
Aev06g0027 478 MobiDBLite consensus disorder prediction 266 312 - -
Aev06g0027 478 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 32 461 - -
Aev06g0027 478 Gene3D Classic Zinc Finger 79 148 - -
Aev06g0027 478 SUPERFAMILY beta-beta-alpha zinc fingers 95 198 IPR036236 -
Aev06g0027 478 Gene3D Classic Zinc Finger 172 238 - -
Aev06g0027 478 ProSitePatterns Zinc finger C2H2 type domain signature. 98 118 IPR013087 -
Aev06g0027 478 MobiDBLite consensus disorder prediction 60 79 - -
Aev06g0027 478 PANTHER PROTEIN INDETERMINATE-DOMAIN 12 32 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0027 Aev-Chr6 240046 242647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0027 40 447 IDZ Gene Family AT4G02670 46.394 7.18e-111 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev06g0027 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0027 K25870 - gmx:100788975 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0699 02 5673390 5678533 Aev06g0027 06 240046 242647 PCT