Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0026 ATGAACTATTTGTACCCAGTGAAGGAAGAGTACCTAGAACAACCATCATCATCATCTTCATCTCAGATAGGTTTTGGTGGTGGTGGTGAGCCTCCAATTGCTCCTCCTCCACAGCCAATGGAGGGCCTCCATGAAATGGGGCCACCACCATTCCTGACCAAGACCTATGATGCAGTGGATGACCCCACCACAAATCACATAGTCTCATGGAGCATGAGTGGTGCTAGCTTTGTGGTTTGGGATCCCCATGCCTTCTCCAGAGGCCTCCTTCCAAGGTACTTCAAGCATAACAACTTCTCCAGCTTTGTCAGACAACTCAACACCTATGGCTTCAGAAAAATTGATCCAGATAAATGGGAATTTGCAAATGAAGGGTTCCTGAGAGGGCACAGGCACCTATTAGCAAACATAAGGAGAAGGAAGGCACCATCTCAGCCTGCTATTCTTCCTTCACAGCAAGCACAAGGTCACTGTGTTGAAGTTGGGAGATTTGGACTTGATGAAGAGATTGATCGATTGAGGCGAGACAAGCAGGTGTTGATGATGGAGCTTGTGAAGCTAAGGCAGCAGCAACAGAACACAAGAAGCTACCTTCAAGAAATGGAGCAAAGGCTGAAGGGGACTGAGATCAAGCAGCAGCAGATGATGGCATTCTTGGCTAGAGCAATGAAGAATCCTGTTTTCATTCACCAATTGCTCCAACAGAAGGAGAGGAGGAGGAAGGAGCTTGAAGATGCAATGACCAAGAAGAGGAGAAGGCCTATTCAGCAAGGGCCTAGCACAAGTGTGAAGGTTGAGCCTTCGGATGTTGGGGAGTTTGGGTTTGGAGTCTCTGAATTGGAGGTGTTGGCTATGGAGATGCAAGGTCTTGGAAGAGGTAGGAGAGAGCAAGAGGCAATGTTGGAGGTAAATGAGAGGCTTGATAAGGAGCTTGATGAAGGGTTCTGGGAGGAATTGTTCAGTGAGAGATTTGAGGCTGAATTGGACATTCCTTCCTCCTCTACTCATGGGCATGCTGGTGGTGAAGATGAAGATGTCAATGTGTTGGCCAATCGATTAGGCTACTTGGGTTCAAGTCCCAAGTGA 1086 0.477 MNYLYPVKEEYLEQPSSSSSSQIGFGGGGEPPIAPPPQPMEGLHEMGPPPFLTKTYDAVDDPTTNHIVSWSMSGASFVVWDPHAFSRGLLPRYFKHNNFSSFVRQLNTYGFRKIDPDKWEFANEGFLRGHRHLLANIRRRKAPSQPAILPSQQAQGHCVEVGRFGLDEEIDRLRRDKQVLMMELVKLRQQQQNTRSYLQEMEQRLKGTEIKQQQMMAFLARAMKNPVFIHQLLQQKERRRKELEDAMTKKRRRPIQQGPSTSVKVEPSDVGEFGFGVSELEVLAMEMQGLGRGRREQEAMLEVNERLDKELDEGFWEELFSERFEAELDIPSSSTHGHAGGEDEDVNVLANRLGYLGSSPK* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0026 361 SMART hsfneu3 47 140 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev06g0026 361 MobiDBLite consensus disorder prediction 240 267 - -
Aev06g0026 361 Coils Coil 229 253 - -
Aev06g0026 361 ProSitePatterns HSF-type DNA-binding domain signature. 90 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev06g0026 361 Coils Coil 170 204 - -
Aev06g0026 361 MobiDBLite consensus disorder prediction 12 44 - -
Aev06g0026 361 Gene3D - 44 141 IPR036388 -
Aev06g0026 361 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 36 335 IPR027725 -
Aev06g0026 361 SUPERFAMILY "Winged helix" DNA-binding domain 47 140 IPR036390 -
Aev06g0026 361 MobiDBLite consensus disorder prediction 30 44 - -
Aev06g0026 361 PRINTS Heat shock factor (HSF) domain signature 102 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev06g0026 361 PRINTS Heat shock factor (HSF) domain signature 89 101 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev06g0026 361 PRINTS Heat shock factor (HSF) domain signature 51 74 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev06g0026 361 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-7A 36 335 - -
Aev06g0026 361 Pfam HSF-type DNA-binding 51 140 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0026 Aev-Chr6 227111 228724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0026 29 359 HSF AT3G22830 52.255 3.38e-124 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Aev06g0026 HSF_DNA-bind 1.3e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0026 K09419 - gmx:100794264 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0026 06 227111 228724 Aev02g0698 02 5655193 5656985 PCT