Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0021 ATGGAAGATAATGAGAACCCAAGAAAGCCGGAGGCCCTCAAACGGTCGTTTGCTGACACTGTCAAAAGGGGCAAATCTCATATGCTGGGGGACGAGATGGAAGACCCTCTCCTGTCATCTGATGAGGAGCCAGACACAGAGGATAGTGATGACGACTCTGCCTGCAAGAAATTCGAGGAGGATATAAAAGCGGCAAGAGATGACAATGGCTTACCATTGGCGGAGGATCTAGAGGCCCGCTCCTCGGATAAGGAAACAACTAAGAACTTGAACAAGAAGGAGGGTGAGAAGGGGCACCCTGACCCACAATTGAACGATCCCTCAAAGTTTGGAGCCTGGATGCTGGTCCAGAGGCCGAAACGTGGAAGAAGGATGGGGATGATGAACGATAAGAGTGGGGCCAGTGGGGGGACCCACATCAACCATAATGGAGACAAACCTCAAGGACATGTATCGAGATTCTCTGTTCTTGAGGAGGAAAATATTCCTGACAATGTTTCGTTAGACCAAGGATTGCATGACGCTAATACTGAGGATAAATATGATGGTGTGGCCCATGCCCCAAATACGGACAAAGCAAAATGGAGAGATCGTATCCCACATAAGAAGGTTCTAGAAGATAATACCTCTAATATCCCTCTCTCTAGTAGTAGAAGAGATGTCATCAACTTGGAAGAGAACACAGCAATATTGGGTGGCCCTTCTTCAGAAACCAATAAGGGGCCACAAAAGCGAACTGAACAGAAATGTACCCATGTCACTCAGAATCCAAATACAGCCCTTCACAAGACACTTCCGTGTACCTCCCCTTCTGAGCCCAGCCAGGATTTCTTTGGGAGCCCATCACATTACGAAATTCTAGAACAGATTGGCAAAGGTTCCTTTGGTTCTGCTCTTCTTGTTAGGCACAAACATGAAAAGAAAAAGTATGTTCTCAAGAAGATTCGCCTTGCTTGCCAAACTGACAGAACCCGCAGGTCTGCACACCAGGAGATGGAACTTATATCTAAAGTTCAAAATCCATTTATTGTGGAGTATAAAGACTCTTGGGTAGAAAAAGGTTGTTTTGTCTGCATTGTCCTCGGCTATTGTGAAGGAGGAGACATGGCGGAAGCTATAAAAAAGGCTAATGATATTCATTATCCTGAAGAGAAAATTTGTAAGTGGCTTGTTCAACTGCTGATGGCACTTGATTACTTGCATGTAAACCACATTCTTCATCGAGATGTCAAGTGCTCAAATATATTCTTGACTAAGGATCAAGATATACGCCTTGGTGACTTTGGTCTTGCTAAAATGTTGACATCTGATGATCTTGCTTCCTCAGTAGTTGGAACTCCAAGTTATATGTGTCCTGAGCTTCTTGCTGATATACCTTATGGTTCTAAGTCAGATATCTGGTCTTTAGGATGTTGTATTTATGAAATGGCGGCTCACAAACCAGCTTTTAGAGCTTTTGATATACAAGCATTGATTAACAAAATAAACAAGTCTATAGTGTCTCCATTGCCTACCATGTATTCTGGTGCTTTCCGAGGGCTTGTCAAAACTATGCTGCGGAAAAATCCAGAGCTTAGGCCAACTGCTGCTGAGTTACTGAATCATTCACATCTTCAGCCTTACATTGTTAAAATTCAGCTAACACTAAACAGCCCCAGAAGAACCTATGTGAGAAGAACTCGGTTTATAGAGCCAGAATCTGTTTCATCTATTTCTGATCAAGATAAACACTTGTCATTGAGAAATAACAAGGCCTTGAATCCTAGTACTTCTGGAACTGAGCAAAGTTCTATGTGTTCTACTCAAAGAGCACATGGATCATATGCTTATTTAGAAGAGAATATGTATGACTATGAACTATCTTTTGGCTGTGTCCATGATAAATGCAACACTAGCAAATCAAAAGCCAGAAAGTCCTCAACTGTCGAGAGAACTCCAAAATTGAGGACAGATAAAGATTCTGCCTCCCCCAGAGGCCAGATATGGAAACCATCAAAGACATCTCGTTCGGATTCAAAGCGTGGTTCGAATCTAGTATCACATACATCAACCCGTAGAGCATCTCTTCCACTACCTACAAGAACCAAGGCTACAACATCAACACCTTATAGAGGAGCCAATGTTGATATCCTCCAATGTGTGGACACTCCTGATGTTTCTGTCAACACGCCGCGAATCGACAAGATTGCAGAATTCCCTCTGGCCTCATGTGAGGATCATAATTTCTTCTCTGTCCATGGACCATCATCGGCATCGGCTCACTGCTCCTCATCTGATGGAAGTGCTGAATGCTCAACAATCACAAAGGACAAGTGCACAATCCAGGTTGTGGACAAAGTCACTGTCCATAGCAGCAATTATGGCAAAAAGCTAGTAAAAGGTGGTGTTTCAAGGCACCCCTCTGGTGAGTTATTACATGGAAAGCGTAGATTTGATACCTCATCATACCAGCAACGTGCAGAGGCATTGGAAGGGTTGCTAGAGTTCAGTGCAAGGCTACTGCAGCAACATAGGTTTGAAGAGCTTGGAGTGTTGCTGAAGCCATTTGGGCCAGAGAAGGTTTCTCCAAGGAAACAGCTATTTGTTGCTAAGAGCTTCAAAGAAACTACTACTGTGGTCTAA 2622 0.4355 MEDNENPRKPEALKRSFADTVKRGKSHMLGDEMEDPLLSSDEEPDTEDSDDDSACKKFEEDIKAARDDNGLPLAEDLEARSSDKETTKNLNKKEGEKGHPDPQLNDPSKFGAWMLVQRPKRGRRMGMMNDKSGASGGTHINHNGDKPQGHVSRFSVLEEENIPDNVSLDQGLHDANTEDKYDGVAHAPNTDKAKWRDRIPHKKVLEDNTSNIPLSSSRRDVINLEENTAILGGPSSETNKGPQKRTEQKCTHVTQNPNTALHKTLPCTSPSEPSQDFFGSPSHYEILEQIGKGSFGSALLVRHKHEKKKYVLKKIRLACQTDRTRRSAHQEMELISKVQNPFIVEYKDSWVEKGCFVCIVLGYCEGGDMAEAIKKANDIHYPEEKICKWLVQLLMALDYLHVNHILHRDVKCSNIFLTKDQDIRLGDFGLAKMLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMAAHKPAFRAFDIQALINKINKSIVSPLPTMYSGAFRGLVKTMLRKNPELRPTAAELLNHSHLQPYIVKIQLTLNSPRRTYVRRTRFIEPESVSSISDQDKHLSLRNNKALNPSTSGTEQSSMCSTQRAHGSYAYLEENMYDYELSFGCVHDKCNTSKSKARKSSTVERTPKLRTDKDSASPRGQIWKPSKTSRSDSKRGSNLVSHTSTRRASLPLPTRTKATTSTPYRGANVDILQCVDTPDVSVNTPRIDKIAEFPLASCEDHNFFSVHGPSSASAHCSSSDGSAECSTITKDKCTIQVVDKVTVHSSNYGKKLVKGGVSRHPSGELLHGKRRFDTSSYQQRAEALEGLLEFSARLLQQHRFEELGVLLKPFGPEKVSPRKQLFVAKSFKETTTVV* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0021 873 PANTHER SERINE/THREONINE-KINASE NEK4 283 861 - -
Aev06g0021 873 MobiDBLite consensus disorder prediction 633 701 - -
Aev06g0021 873 MobiDBLite consensus disorder prediction 50 103 - -
Aev06g0021 873 Gene3D Phosphorylase Kinase; domain 1 264 363 - -
Aev06g0021 873 MobiDBLite consensus disorder prediction 633 656 - -
Aev06g0021 873 MobiDBLite consensus disorder prediction 660 701 - -
Aev06g0021 873 ProSiteProfiles Protein kinase domain profile. 284 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g0021 873 MobiDBLite consensus disorder prediction 573 602 - -
Aev06g0021 873 SMART serkin_6 284 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g0021 873 Pfam Protein kinase domain 284 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g0021 873 ProSitePatterns Protein kinases ATP-binding region signature. 290 313 IPR017441 GO:0005524
Aev06g0021 873 Gene3D Transferase(Phosphotransferase) domain 1 366 610 - -
Aev06g0021 873 MobiDBLite consensus disorder prediction 1 146 - -
Aev06g0021 873 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 283 861 - -
Aev06g0021 873 SUPERFAMILY Protein kinase-like (PK-like) 282 598 IPR011009 -
Aev06g0021 873 CDD STKc_Nek 283 538 - -
Aev06g0021 873 ProSitePatterns Serine/Threonine protein kinases active-site signature. 405 417 IPR008271 GO:0004672|GO:0006468
Aev06g0021 873 MobiDBLite consensus disorder prediction 35 49 - -
Aev06g0021 873 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0021 Aev-Chr6 177169 189127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0021 280 556 MAP Kinase Kinase Kinase AT1G53570 31.010 4.42e-37 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Aev06g0021 Pkinase 9e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0021 K08857 - gmx:100810347 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0021 06 177169 189127 Aev06g0021 06 177169 189127 ECH
Aev06g0021 06 177169 189127 Aev02g0693 02 5611968 5617063 PCT