Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0004 ATGTCGAATTCAAAAGTGATGAAGAATATTGGAGGTGATGTAAACAGAGGAAGCACCAATGGTAACTTATCCGTTGGAACTCGAATGATATCTGCATCATTGAGTTTAAGAGGCCATGTGCCTATAGAAGATGTAAGAACAGATATTGAAGGACTTCGTATTGATGAAAGCGCTTCAAAAGTGCTAGACAAAATAATGGAGCTACTATTGAGTGCTGGTTGGGAAATTGGTTTGAAGAAAAGGAAAGGGAGAGTTGAAGAAGATGTTGTCTATTACAACCTGAAAGGAAAACCTTATTGGTCCATTGTGTCTGCCTATGAGGATCTCAAACTACATTGTGAATCTGGTGATGGTATTGGAAAATTCTATTCTAGAGATTTCCAATTTGTACCCATATCACAACACAAAATTGATATGTTGTTTGAGACACCCTCTAACAAGAAAAGAAAAGCCAATACAAAAGTGGCACAAAAAAATCAATTTGGATGCAAGAATTATCATTTTGTTGATACATCTGAAGATCCAAATGACGATGTTTATGAGAAACTTGAAAGGCTTGTTGGGGTCAAAAATGAAATTGGGCATGGACTTTCTTTGACTATTACTTCTCGGTCAGATGATAATGTTGACTCTAATTCTCCACAAGCATTGGAGTGTGATTCCAAGCTAGAAGATGCATTGTCGATATTGGAAGATTGCTTCATGCCACAATATGATAATAGGAGCGGGATATATATCATGGAGAGTGTTCTATACAATTGTGGGTCAAACTTCAACCGGTTGAACTATAGGAGATTTGTCACTGCAATTCTAGAAAGAGGGGACGAGATCATTTGTGTTGCAACTCTGAGGGTTCATGGAAACAATGTGGCAGAGATGCCATATATTACGACCAGCCATCAGTACAGGAGACAAGGAATGTGCCGAAAATTTCTGACAGCCATAGAAACTACACTGAGTAGTTTAGGTGTTGAGTTGCTGCTCATTTCATCGATCCCTGAACACGTAGAAACTTGGAGTTCTGCCTTTGGGTTTCAGCAAATGAACTTGGAAACCAAAAAAGCTATAGAGAACATGAACTTGGTTGTATTCTCTAATGCAATTATGCTGCATAGAAAGATACAATGCAATGGCCATGATTCTCTTATTGTTGCCCAGCATGGTGCTGATCTGATTTCTACTAGAGATCCAAACCCTGGGATGAATGTTCATGACTTAGAGGAGCCAAGTAATGTGAACTATAATAATGAAGCCCTGTTTCTTGGATCTAGTTATGCTCCTCTTGCTGATGATGGAGCATTTCATCCCTCAAATGCTAATGATGAAGCTCATGGTTCAGATCTTCCCCCTATTGATGCCTCATTGATGAATATTGTTGATGAACATGGTAATGATGATGATAATGTGAAAATTGCTGAGAAAGACGACCCTGCAACTGTTGTTGATGAAGCTGTAAACTACACACTTGATTATCTCAGAAACTTACTCTGA 1491 0.3856 MSNSKVMKNIGGDVNRGSTNGNLSVGTRMISASLSLRGHVPIEDVRTDIEGLRIDESASKVLDKIMELLLSAGWEIGLKKRKGRVEEDVVYYNLKGKPYWSIVSAYEDLKLHCESGDGIGKFYSRDFQFVPISQHKIDMLFETPSNKKRKANTKVAQKNQFGCKNYHFVDTSEDPNDDVYEKLERLVGVKNEIGHGLSLTITSRSDDNVDSNSPQALECDSKLEDALSILEDCFMPQYDNRSGIYIMESVLYNCGSNFNRLNYRRFVTAILERGDEIICVATLRVHGNNVAEMPYITTSHQYRRQGMCRKFLTAIETTLSSLGVELLLISSIPEHVETWSSAFGFQQMNLETKKAIENMNLVVFSNAIMLHRKIQCNGHDSLIVAQHGADLISTRDPNPGMNVHDLEEPSNVNYNNEALFLGSSYAPLADDGAFHPSNANDEAHGSDLPPIDASLMNIVDEHGNDDDNVKIAEKDDPATVVDEAVNYTLDYLRNLL* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0004 496 Gene3D - 238 366 - -
Aev06g0004 496 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 225 350 IPR016181 -
Aev06g0004 496 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 56 157 - -
Aev06g0004 496 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 179 377 - -
Aev06g0004 496 PANTHER PHD FINGER PROTEIN 12 56 157 IPR042163 GO:0003714|GO:0045892
Aev06g0004 496 PANTHER PHD FINGER PROTEIN 12 179 377 IPR042163 GO:0003714|GO:0045892
Aev06g0004 496 MobiDBLite consensus disorder prediction 432 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0004 Aev-Chr6 40481 44122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0004 178 389 PHD Transcription Factor Family AT1G05380 46.047 3.52e-57 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0004 - - lang:109346644 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0004 06 40481 44122 Aev06g0004 06 40481 44122 ECH
Aev06g0004 06 40481 44122 Aev02g0660 02 5195830 5202915 PCT