Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3762 ATGGAAGATGGAAACAACCTCTCAGAGGGAACCAGGGCATGGGAGGAGATGGTGAAGCAAGCCGCGGCACTCGGAGGCGCTCGGCGAGCCAGGAAGCGATACGTCGGAGTCCGCCAGAGGCCATCGGGGAGATGGGTGGCCGAGATTAAGGACACAATTCAGAAGATAAGAGTGTGGTTAGGGACTTTTGACACCGCTGAGGAAGCTGCAAGAGCATATGATGAAGCCGCGTGCCTGCTTCGCGGCGCAAACACGAGGACTAACTTCTGGCCCTGTTCTCAATCTTCCTCGAGCCCTGCTCTGTCCTCGAAGATCACGAATCTTCTCCTTCAGAGGCTTAAGGAAAGGAACAACAACAACAGTTCGTGTTTGAACAATTCTGCCCTCGTCAATCACCAACAAATTCAAGAACAAGTAGAAGTAGAATCATATGGAGCAGTTTCTTCAACTGCAGGGTTCTTAATTGACCAATTCAGTGATCTGCTCAACGATCCTGAAGATTACGGCGCAAGCAATGATGAATTCCTGAATAATAGTGCTCAGATTGATTACATCACGAGCAGTTTCGAGTCGTGTTTGACCGAAAAGGACGATAAATCCAAGGGAACTGAGGAGATTGGTATGGATTACTACAAGTGTAGCAATTTGACACAAGCCTCCTCGAGTGATGACAGCAATTCGGGAGCCGAAAGGGAGGAAGACAGCGAAGAAGAGAGCATCCAGAACACTGAATTCCACGCCGCACCGGATTTCAGATTCCTCGACAGCATAGCTCCACCTAGCTACTACTCTCCATTTGAGATTGCTGAAGAGATTGAGGAGCCTGTGGAGCCAGAGAACTATGGTGATGAGCCTTCAATGCTAAGAGCAGCAATGAAAAGAATGAAATATGAGAGGAAATTCTCGGCTTCGCTTTACGCCTTTAATGGCATACCTGAATGCTTGAAGTTCAAACTTGAATCAGGGAACATAAAGGGAAGAGGAATTGGTGAACAATTGAATAGCCTTCAAATGGCATGTACCAAGAACAAAGGTGAGAAGAGTAAGGAAGAGAATGAGTATATGGAAGCAATGGTTGGAAAAGAGGAAGAAAATCATCAAAGAACAATTGGCATGAGTTCTTCTTCTTCATCTAGTATTGATGGAGAACTTTTGCTTTGGAGTTCACTGGATCTTCCTCCTATTTGCTATGTTAATTTGTTGGAAAATGGCTCATTCAATCAGTGA 1227 0.4588 MEDGNNLSEGTRAWEEMVKQAAALGGARRARKRYVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGANTRTNFWPCSQSSSSPALSSKITNLLLQRLKERNNNNSSCLNNSALVNHQQIQEQVEVESYGAVSSTAGFLIDQFSDLLNDPEDYGASNDEFLNNSAQIDYITSSFESCLTEKDDKSKGTEEIGMDYYKCSNLTQASSSDDSNSGAEREEDSEEESIQNTEFHAAPDFRFLDSIAPPSYYSPFEIAEEIEEPVEPENYGDEPSMLRAAMKRMKYERKFSASLYAFNGIPECLKFKLESGNIKGRGIGEQLNSLQMACTKNKGEKSKEENEYMEAMVGKEEENHQRTIGMSSSSSSSIDGELLLWSSLDLPPICYVNLLENGSFNQ* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3762 408 CDD AP2 32 89 IPR001471 GO:0003700|GO:0006355
Aev05g3762 408 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 340 - -
Aev05g3762 408 SUPERFAMILY DNA-binding domain 33 90 IPR016177 GO:0003677
Aev05g3762 408 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
Aev05g3762 408 Gene3D AP2/ERF domain 32 90 IPR036955 GO:0003700|GO:0006355
Aev05g3762 408 Pfam AP2 domain 33 82 IPR001471 GO:0003700|GO:0006355
Aev05g3762 408 PANTHER AP2/ERF DOMAIN TRANSCRIPTION FACTOR 4 340 - -
Aev05g3762 408 MobiDBLite consensus disorder prediction 217 241 - -
Aev05g3762 408 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
Aev05g3762 408 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Aev05g3762 408 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3762 Aev-Chr5 36272357 36273583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3762 31 109 AP2-EREBP Transcription Factor Family AT5G19790 72.152 3.14e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev05g3762 AP2 3.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3762 K09286 - gmx:100790398 518.079