Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3733 ATGGACATAATCACTACCACCACACCAAAATCTCCCGAACCCGAATCCGAAACACCCACCCGGATCCAACAACCCACCACCACTAAACCTTTGTCATTCTCCAACGGAGTCCTCAAACGCCACCACCACCCTCACCATCCCTACAACCACCTGGCCAATCCCGGCGCCGCCGCCGCTGCGGCCTCGGTGACATACAAGGAATGCCTGAAGAACCACGCCGCCAGCCTCGGCGGCCACGCCCTCGACGGCTGCGGCGAGTTCATGCCGGCCCCCACCGCCACCGCCGGCGACCCAGCATCCATCAAGTGCGCCGCCTGCGGCTGCCACCGCAACTTCCACCGCCGCGAATCTGACGAGCCGCCACTGTCTCCTGTGATCGAGTACCAGCCCCACCACCGTCACCACCCTCCGGCGCCGCCACCTCCACCAGTTTTCCACCCTCCAAGCAGCAACAACCATCACCCCCGGAGCCCCAGGTCGGCCTCCCCACCTCCGATCTCGTCGTCCTACTACCCGGCGTCGGCCCCTCACATGCTCCTCGCACTCTCGTCCGGCGGCGGGCTCCCCGTGCCGCCGGAGAACACAGCCGCACCGGCGGGGCACCCCTTAGGGTCCCGAAAACGGTTCAGGACCAAGTTCACCCCAGAGCAGAAGGAAAAGATGCAGCGCTTCGCAGAACGCGTGGGATGGAAGATGCAGAAAAGGGACGAGGATCTCATTCAGGAATTTTGCCATGAAGCAGGCGTGGATCGTGGGGTTCTCAAAGTGTGGATGCACAACAACAAGAACACTTTCGGGAAGCGTGACCTCAATGCTTCCGCCGATGCTAATGCTAATGCTGTTACCACTCCAACTACTGCCAATGCTAACAACTATGCTGCCAATAGGAATCTTCTCGAGCGAGTCCTCCCCGATAACGCTGCTAACGGTAACGCTAACCGTCTTAACGGCGATGGCAGCAGCGGCAACGACGATGATAGCGGCGCTAACGGTGGTGCCACTAATGGGTCCTCTTCTTCTTCTTGA 1026 0.6062 MDIITTTTPKSPEPESETPTRIQQPTTTKPLSFSNGVLKRHHHPHHPYNHLANPGAAAAAASVTYKECLKNHAASLGGHALDGCGEFMPAPTATAGDPASIKCAACGCHRNFHRRESDEPPLSPVIEYQPHHRHHPPAPPPPPVFHPPSSNNHHPRSPRSASPPPISSSYYPASAPHMLLALSSGGGLPVPPENTAAPAGHPLGSRKRFRTKFTPEQKEKMQRFAERVGWKMQKRDEDLIQEFCHEAGVDRGVLKVWMHNNKNTFGKRDLNASADANANAVTTPTTANANNYAANRNLLERVLPDNAANGNANRLNGDGSSGNDDDSGANGGATNGSSSSS* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3733 341 MobiDBLite consensus disorder prediction 1 47 - -
Aev05g3733 341 SUPERFAMILY Homeodomain-like 196 267 IPR009057 -
Aev05g3733 341 MobiDBLite consensus disorder prediction 113 169 - -
Aev05g3733 341 ProSiteProfiles 'Homeobox' domain profile. 204 268 IPR001356 GO:0003677
Aev05g3733 341 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 206 263 IPR006455 -
Aev05g3733 341 Gene3D - 193 266 - -
Aev05g3733 341 MobiDBLite consensus disorder prediction 304 341 - -
Aev05g3733 341 MobiDBLite consensus disorder prediction 150 168 - -
Aev05g3733 341 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 64 116 IPR006456 -
Aev05g3733 341 MobiDBLite consensus disorder prediction 135 149 - -
Aev05g3733 341 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 4 282 - -
Aev05g3733 341 Pfam ZF-HD protein dimerisation region 63 117 IPR006456 -
Aev05g3733 341 MobiDBLite consensus disorder prediction 309 341 - -
Aev05g3733 341 MobiDBLite consensus disorder prediction 184 210 - -
Aev05g3733 341 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 65 116 IPR006456 -
Aev05g3733 341 MobiDBLite consensus disorder prediction 1 34 - -
Aev05g3733 341 PANTHER HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN 4 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3733 Aev-Chr5 36020776 36021801 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3733 1 262 ZF-HD Transcription Factor Family AT5G15210 52.593 1.33e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aev05g3733 ZF-HD_dimer 1.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3733 - - ahf:112783874 351.288